Amphiprion ocellaris (clown anemonefish): 111582978
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Entry
111582978 CDS
T06018
Symbol
nbn
Name
(RefSeq) nibrin isoform X3
KO
K10867
nibrin
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03440
Homologous recombination
aoce04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111582978 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
111582978 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoce03032
]
111582978 (nbn)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111582978 (nbn)
DNA replication proteins [BR:
aoce03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
111582978 (nbn)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
111582978 (nbn)
BRCA1-C complex
111582978 (nbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
111582978
NCBI-ProteinID:
XP_023147640
Ensembl:
ENSAOCG00000013617
LinkDB
All DBs
Position
9:4909598..4928250
Genome browser
AA seq
819 aa
AA seq
DB search
MWILTPLQPGGGTHYLLSGKEYVVGRKNCDILLPSDQSISRAHAQLTASDETLILKDTSK
YGTFVNSERLTAPVSLKSGDEVTFGVFHSKFSVGRQKPVVCSSCLNNEGKATLSQALQAL
GGNLVNTWTEDCTHLVMPSVKVTIKTISALLCCRPIVKPEFFSELNKAVQQKLAPPKAES
FTPEIDEPSLNKEEVNLGVMPARQQLFTGKTFVFLSAKQLKRLSAAVKFGGGSSQLLEES
SLLRNLLESPQTCVIDVITGNSQTLLPPSTTEWVNSVRSIVQRKGLRVITESEIGLAAIY
ASCDKYCNPSNLMPDSDSAPKVKPRIPSASLSQSVAVDETVLPAATQNITAYAANTETSQ
RMEVCEVTGVAAVGETPEKKQNQLREAQNTAAEYVVADTMSSSLNITENSQRKKLDSKLT
DAGTTDVILQPSFPKTNGGTKASFFRESPQKPKTSAQASPQKQSTLINFFQPVGKKRPWE
DEFSDVMSEPKRPVLEPSITVHKTNTTKEISSPSLRGVSETPPESEADLFTGRREEPLNR
KRKEMEAEIQMEELESIMSEDMDGFGEQLSDEQTHKSAKQKQGLTAVESSSKRQRVQREE
EANGTSRQLKLQAGLEKKSSLHNIHSQRPEQHVVVVKTEPLHPTDYMTTNKESRSEKPTA
STSRNIKPVQDDDASFVEDLELIEADITQPKDDTKTLKPVRIKQEVQESKMDEGLPRNQV
LVEFRSLTVSAPPTTKQKQTHSNGCAKNFKCFRKNRVPGSDGFQHIIGGSDLLVHNRGKN
TDLDEWLKDAAEEERQSRREEAVGDDLFRYNPTKLAKRR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctgacgccgctgcagcccggaggtggaactcattacctcctctctggtaaa
gagtatgttgtgggacgtaagaactgtgacatcctcctccccagcgatcagtccatcagc
agggctcacgctcagctcactgcttctgatgagactctgattctaaaagacacctccaag
tacggcacattcgtcaacagcgagcgtctcacagcaccagtgagcctcaagtcaggagac
gaagtgacgtttggagtttttcacagcaaattcagtgtgggtcgtcagaagcctgtggtt
tgttcatcatgtctgaacaacgaaggcaaagcgacactctctcaggctctgcaggctttg
ggtggaaacctggtcaacacctggaccgaggactgcacacacctggtcatgccttctgtt
aaagtcaccatcaagacgatttctgctctgctgtgctgccgtcccatcgtgaagccggag
ttcttctcagagctcaacaaagccgtgcagcaaaagttagcgcctcctaaagctgagagt
ttcactcctgaaattgacgagcccagcctgaataaagaggaagtgaacctcggagtgatg
ccggctcgccaacagcttttcactgggaagacctttgttttcctgagcgccaaacagctg
aagcgcctgagtgcagcggtgaagtttggaggcggcagcagtcagctgctggaggaaagt
tcgctgctcagaaacctgctggagtctccacagacctgcgtgatcgatgttataacagga
aactcccaaactctgctgcctccgtccaccaccgagtgggtaaactctgtgaggagcatc
gtgcaaagaaaaggcctacgagtcatcacagagtctgaaatcggtttggctgccatctac
gcctcctgtgacaaatactgcaacccgtccaacctgatgccagactcagactctgcacct
aaagttaaacccaggattcccagcgcgtcgctgtctcagagcgtcgctgtggatgagacg
gttttacctgcagcaactcagaacatcacagcttatgcagcgaacacagagacttcacag
aggatggaggtgtgtgaggtgaccggggtggctgcagtgggagaaactccagaaaagaag
caaaaccagctccgtgaagctcagaacacagcagctgagtacgtcgtggccgatacaatg
agctcatcgctcaacatcacggagaactcacagaggaagaaacttgactccaaactcaca
gatgcaggtactactgacgtcatactacagccctcctttccaaagaccaacggtggaacg
aaggcttccttctttagggagtctcctcaaaagcctaaaacttctgcacaagcctcccca
cagaaacagtcgactctgatcaacttcttccagccggtcggcaagaaaaggccttgggag
gatgaattctcagatgtcatgtcggagccaaagcgacccgttctggaaccgtccatcacc
gtccacaaaacaaacaccactaaagaaatctcctcaccttcactcagaggcgtttctgag
actccaccagagtcggaggctgatttgttcacaggacggcgagaagaaccactgaacaga
aagaggaaggagatggaggcggagatacagatggaggaactggagtccatcatgtctgaa
gatatggacggcttcggcgagcagctctcagatgagcagacgcacaaatcggccaaacag
aaacaaggtttgactgcagtggagtcttcaagcaagaggcagcgggtccagcgagaagaa
gaagcaaatggaacaagcagacaactaaagctgcaggctggcctggagaagaagtcaagt
ctccataacatccacagccagagacctgagcagcacgttgtcgttgtgaagacggagccg
cttcacccgacagactacatgacgactaataaagagtccaggagtgaaaaaccaactgca
agcacaagtagaaacataaaacctgtacaggatgatgatgcatcctttgttgaggattta
gagctcatcgaagcagatattacccagcctaaagacgacactaaaactctgaaacctgtc
aggatcaagcaggaggtccaagagtctaagatggatgaaggccttcctcgtaatcaggtg
ttggtggagttcagatctctcactgtgtcggctcctccgacaaccaaacagaaacagacg
cactccaatggctgcgcaaagaacttcaagtgtttccgaaagaaccgtgtgccgggttcc
gacggattccagcacatcattggaggatccgacctgctggttcacaacaggggcaagaac
actgatctggatgaatggctgaaggatgcagcagaggaggagcgtcagagcaggagggaa
gaggctgtgggagacgacctgttcaggtacaaccccaccaaactggccaagagacgatga
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