Amphiprion ocellaris (clown anemonefish): 111583016
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Entry
111583016 CDS
T06018
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111583016 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111583016 (scarf1)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Phagocytosis
Scavenger receptors
111583016 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
111583016
NCBI-ProteinID:
XP_054868296
Ensembl:
ENSAOCG00000005288
LinkDB
All DBs
Position
7:7788093..7797536
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AA seq
916 aa
AA seq
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MKFLLGALTALLCCPSSSAQTLDPSGKNVCQDTRDPSKLVCCTGWRQNGKECTIPVCEGE
QACLKDEICLYPGVCRCPPGYYGAQCKTRCPPEFWASDCRQVCQCYPHGRCHPATGECTC
NPNRWGPLCQNTCKCARHGHCHPVHGNCTCDEGWWTSSCAKPCQCSNLRSVGLSCEQLTG
RCQCHRGHWGLKCLVPCNCNQSPCNQRTGVCECEPGWWGPSCDRRCECDPTHSSCDPATG
RCLCHPGYQGVFCNKRCEDGTYGSGCKMRCGYCKDNQVCSATDGVCAACEPGWNGTRCDR
PCAFGYYGDGCKEKCPHCRNNAPCDPTTGICWSCDPGWTGPRCEDACPDRTFGDACSFLC
GPCYHGNCHHVTGRCVCQPGFQGESCNSSCPALQFGLNCSSFCDCGEGVGCHSVTGVCPN
SGRGAVLAGVLVPLFLLLLAVLCCCLCCGGAPVDGKDRAAVAEGGLSVRMKYHVYSVLAN
IGASLPCISDWSSGLPRVTVSHHDPELTFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYC
VPPREDIPAVAGGEFQEMSSKCNMFLDPSGFSSEDITSPFNIPRTSSIAKAKRPSVSFAE
GTRFSPKERRGSAQDPGGLPRSKPKSPWGVLMLSALQSQGRTGEEDEAEGEEREDEVDEQ
VTENQETSCEVTDQDVDRIPSRATLQVPAASGRRRTMSNTAALKGNQQPTPASDAQAGVS
YKVTTVYVTVGKAGRPVTKAEPSSEGPVQAMLRRLGSLQRQREQDSGKPKVKVAEGVTKP
PRRKLGARASVWEQGGPSGGEAGVSKPIRRKHTSHNSTDTANNDTPPAESATPKCPLSSI
LKSVPEVASADSGSDVRAEVNMRQSGDPSAGQTESDYLTVGPAGDTVSLTEVIANEGAVV
NVNDEPCYENVLIKHS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttctcctcggagctctgactgctctgctctgctgcccgtcgtcctcagcacaa
actctggatccttctgggaagaacgtctgccaggatacgagggacccctccaaactggtc
tgttgcactggatggcgtcaaaatggaaaagagtgcactatacctgtatgcgagggtgag
caggcctgtttaaaggatgagatctgtttatatcctggagtatgccgctgcccacctggc
tactacggcgctcagtgtaaaacacgctgtcctcctgagttctgggcttcagactgtcgc
caggtgtgccagtgttacccacatggccgctgtcatcccgccactggtgagtgcacctgc
aaccccaaccgctggggtccattgtgccagaacacctgcaagtgcgcccgccacggccac
tgtcaccccgtccacggaaactgcacctgcgacgaaggctggtggacgtcgagctgcgcc
aagccgtgtcagtgcagcaacctgcgctccgtaggcctcagctgtgagcagctgacaggc
cggtgtcagtgccacaggggccactgggggctgaaatgtctggtcccctgcaactgcaac
cagtcgccgtgtaatcagcggactggagtgtgtgagtgtgagccaggctggtggggaccc
agctgtgaccgcagatgtgaatgtgaccccacacacagcagctgtgacccggccaccggg
cggtgcctgtgccacccgggataccagggagtcttctgcaacaagcgctgtgaagatggg
acgtatggcagcggctgtaaaatgaggtgtggttactgcaaagacaaccaggtgtgctct
gcgactgacggtgtgtgtgctgcctgtgagcccggctggaacggtacaagatgcgaccgt
ccgtgtgcattcggttattatggtgatggctgcaaggaaaagtgtccacattgcaggaat
aatgcaccttgtgacccaacaacggggatatgttggagctgtgatcctggatggactgga
ccaaggtgtgaggatgcctgccctgacaggacatttggagacgcctgcagcttcctgtgt
ggcccttgttaccatggtaactgccatcatgtgacaggaagatgcgtctgtcagccaggc
tttcagggtgagagctgcaacagtagctgtcctgccctgcagttcggtctcaactgttcc
tccttctgtgactgtggtgagggagtcggctgccactcggtaaccggagtctgccccaac
agtggtcgaggtgctgtacttgcaggtgtcctggttcctttattcttgttgctccttgct
gtgctctgctgctgtttgtgttgtggtggagctcctgtcgatggcaaagacagggcggct
gtggctgaaggtggcttgtcagttcggatgaaatatcacgtgtacagcgtcctggcaaac
atcggtgcttccctcccctgtatctctgactggtcctctggtctgcctcgagtcactgtg
tctcaccacgacccagagctgacgttcaaccacagcttcattgagcctccttcgtccggc
tgggtgaccgagggctcgtccttcgacagtgatgaggaggagggagaagctctctactgt
gtccctccaagagaagacatcccggctgtggcgggtggtgagttccaggagatgagctca
aagtgtaacatgttcttggacccctcaggcttcagcagtgaagacatcacctcccccttc
aacatccctcgcacctccagcatagccaaggccaagcggccgtctgtctcgtttgcagag
ggaacccgcttcagtcctaaagagaggcgtggttctgctcaggaccccggcggcctccca
cgcagcaaacccaagtcaccctggggggttttgatgctgtcggccctccaaagtcaggga
agaacgggggaggaggatgaggctgagggtgaggagagggaggatgaggtggatgagcag
gtgactgagaatcaggagacaagctgtgaggtaacagaccaggatgtagacagaattcca
tcccgggctacgctgcaggtccctgctgcatcaggaaggagacggactatgtccaacacc
gctgctcttaaagggaaccagcagccaacacctgcctctgatgctcaggcgggggtctca
tataaagtcaccacagtgtacgtgacggtgggtaaggcaggtcggccggtaacaaaagca
gagccgagctcagaaggccccgttcaggccatgttgagaagactcggcagcctccagaga
cagagggagcaggattctggtaaacccaaggtaaaggtagctgaaggcgtcaccaaacct
cccaggaggaagctgggagctcgggcaagtgtgtgggagcagggagggccctctggaggg
gaggctggtgtatctaaaccaatcaggaggaagcacacctcccacaactccactgataca
gctaataatgacactccaccagcagagagcgccactccaaaatgcccgctctcatctatt
ttaaagagcgtgccggaggtggcctcagctgactcagggtcagatgtgagggcagaagtt
aacatgaggcagagcggtgacccaagtgcaggacaaactgagagcgactacctgactgtg
ggaccagcaggagacactgtgagtctcactgaggtcatcgccaacgagggagcagtggtc
aacgtgaacgatgaaccctgctatgaaaacgtcctgattaaacactcataa
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