Amphiprion ocellaris (clown anemonefish): 111583077
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Entry
111583077 CDS
T06018
Symbol
lrp13
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111583077 (lrp13)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111583077 (lrp13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
EGF
SGL
EGF_Teneurin
hEGF
Motif
Other DBs
NCBI-GeneID:
111583077
NCBI-ProteinID:
XP_023147771
Ensembl:
ENSAOCG00000011033
UniProt:
A0AAQ5YVB5
LinkDB
All DBs
Position
6:12855819..12867997
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AA seq
1352 aa
AA seq
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MGGCLFLCVLLLLGSLQVVSGESSLLKCGLGFAKCKDGSECIPYSHVCDGENDCKDGSDE
DNCESGCNEGQFQCAHGKKCIEKNQVCDGVPQCQDRSDELHCLKQSEDCIHRCDKDRCLP
AAFFCDGERDCLDGSDEANCASEEQEEEVTSSPTTSAPAVSKPIKCSLGSKPCKDNTECV
LYNHVCDGEADCRDGSDEEGCLSSCEADQFQCAHGKKCIEQSQVCDGVFQCQDRSDELDC
TKPIEGCTHQCSDNSRCIPNSFLCDGERDCWDGSDEANCADQECSPAEFKCTSGQCVSAT
MRCDGHPDCWDRSDEESCTKPPVCSTKHRCPQSKECLVQEWICDGDQDCKDGTDEKDCPV
VPLNCGEFQWSCKSRTKCIPAAWRCDGMKDCDDDSDEIECGVAICHQFQCGSQECLDPAL
VCNGITNCADGSDEGGSCQIKCAETDNKRCSQTCYSTPQGPRCRCTAGFRLLEDGLTCAD
IDECEDQTSAVCSQLCINSPGSYQCDCHPGFIMEADGQRCKITGEPFLLASVQTDLYLYG
LRSASLDVLSSTAKKAILSLDYDWREQKVFWVSLDTESIRWSSLDQKSTGTLIKGVRADS
VAVDWLGRNLYWIDGVNSQIVAIRLATAPVRSLDYSIILDEDLDQPRCLALLPQKGLMFW
TEIGNAAKIERAGMDGSDRKAVVNSSLGWPGGVTVDTISGRIYWTDERLKAIGSTTLDGD
DIWILQMKETTNPFSVAVFNDVLYWSDAKKRVVQAAQKISGKNRQILLKRPSQPFAVKII
HPMLQMSTENPCNMVDCSHLCVLAPGPSAVCKCPSGLLLAEDGMTCSSLRNSAFLLLLSP
STVTQIYLQSRHTAAKLKGWPEHLALQIPSINEATIMDYSLREHLLFLTDDGTTSLSSFK
LRDSDLVSQGQLLKLLGDTITAMALDWVTLNVYWSSNKQPRLQVTSVTGAYTAVLIKEGI
NRVESIALHPPSGRVCYTNVDLQGAGTMATVECANMDGAERRVVWKDAVQPTSLVFSGDG
DTIYWADTSLGTIGSVPIDGSGYRELRAGDDLATVALSDDTLLWMTVSDKARLWYREDQQ
PKKLWFEVGTQVVALKAFSQSSQTGSNQCTEDNGSCQHLCLATPTGRTCKCAHDHVLMND
THCSPEQHCPAGSRPCLDQASCQPVEKFCNGHVDCSDHSDENCVSLKQWPDSKVSAPNQP
PSFLPSSPSPLPPLLGVSGPSTTLNDSSQLMNLQAQECSKKQCNGNGRCVEIKGVPACVC
SVGYSGNSCQDHRSKTMQGPIVYGAAGVCGLVVITVIAVLVKRKRAANLRRGGAAVKETS
MTDLENKVEAPPSKQTTPADADKSEEAVSSVE
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgggtggatgcttgttcctttgtgtgcttttattgttggggtccttgcaagttgtttca
ggtgaaagcagtcttttgaagtgcggcctgggctttgcaaagtgcaaagatggctcagag
tgtattccctacagccatgtgtgtgacggagagaatgactgcaaggacggttcagatgaa
gacaactgtgaatcaggatgcaatgaaggtcagttccagtgtgctcatgggaagaaatgt
atagagaagaaccaggtgtgtgatggtgtccctcagtgtcaggaccgctctgatgaactg
cactgtttgaagcaaagtgaggactgcatccaccgttgtgacaaggatcgctgcctccct
gcagccttcttctgtgacggagagagggactgtttggatggctcagacgaggccaactgt
gcatcagaggaacaagaggaagaagtgaccagtagccctacaacctctgcgcctgctgtc
tctaaacccattaagtgttctttgggctccaaaccctgcaaggacaacacggagtgtgtc
ctctacaaccacgtctgtgacggggaggcagactgcagggacggttcagatgaggaaggc
tgtttatcatcatgtgaagccgaccagttccagtgtgcccatggaaagaagtgcatagag
cagagccaggtgtgtgatggtgtgtttcagtgtcaggaccgctccgatgagctggactgc
accaagcccatagagggctgtactcaccagtgtagtgacaacagccgctgcattcccaac
agctttctttgtgacggggagagggactgctgggacggcagtgacgaggccaactgcgct
gaccaggaatgcagccctgctgagtttaagtgtaccagtgggcagtgtgtgtctgccaca
atgcgttgtgatggtcatccagactgctgggaccgttcagatgaggagagctgcaccaaa
ccaccggtctgcagcaccaagcaccgctgccctcagagcaaggagtgtctggtgcaggag
tggatctgtgatggagaccaggactgcaaagatggcactgatgagaaggattgccctgtg
gttccactgaactgtggcgagttccagtggtcgtgtaaatccaggaccaagtgtattcct
gcagcctggaggtgtgacggcatgaaggactgtgatgatgacagtgacgagattgaatgt
ggtgtggcaatatgccaccagttccagtgtggcagtcaggagtgcctggatccagcccta
gtgtgcaatggcattaccaactgtgcagatggttcggatgagggaggcagctgtcagata
aagtgtgcagagacggacaacaagcgctgctcccaaacctgctacagcacacctcaggga
ccgcgctgtcgctgtactgcagggttcaggctcctggaggatgggctgacctgtgctgac
attgatgagtgtgaggatcaaacatcagctgtgtgcagtcagctgtgcatcaactctcca
ggttcataccagtgtgactgccacccaggattcataatggaggcagatggccagcgctgc
aagatcactggtgaacccttcctgttggcatcagtccaaacagacctctacttgtacggc
ttgcgcagcgccagcttagatgtgttgtcctccactgccaaaaaggccatcctttctctg
gactatgactggagggaacagaaggtcttctgggtcagtttggacacagagagcatcagg
tggtcttcactggaccaaaagtccacaggaactctgattaaaggtgtccgggctgattct
gtagctgtggactggctcgggaggaacctgtactggattgatggggtgaatagtcagatt
gttgccatcagactggcaacagctcctgtgaggtcactggactacagcatcattctggat
gaagacctggatcaaccccgctgtctagccctgctgccacagaaagggttgatgttctgg
acagagattggtaatgcagcaaagatcgagcgcgctgggatggatgggtcagacaggaag
gcagtggtgaactccagtttgggctggcctggtggtgtgactgtggacaccatctctggc
agaatctactggacagatgaaaggctgaaggcaattggctctaccacactggatggtgat
gacatttggatactccagatgaaagagaccaccaacccattctctgtggcagtgttcaat
gatgtgctctactggtctgatgctaagaaacgagtggtgcaagctgctcagaaaatttct
gggaagaaccgtcaaattctcctgaaaagacccagccaaccatttgctgtgaagatcatc
cacccaatgctccagatgagcactgagaacccctgcaacatggtggactgctcccacctt
tgtgtgttggcccctggacccagcgctgtatgcaagtgtccttctggactgctgctggct
gaggatgggatgacctgctccagcctgcgtaattcagcatttctactgctgctgtctccc
tccactgtcactcagatctacttgcagtcccgacacacagcagccaagctgaagggttgg
cccgaacacctggccttgcagatacccagcatcaacgaagccaccatcatggactacagt
ctacgtgagcacctcttgttcttgacagatgatggcaccacttctctcagttcattcaag
ctaagagactctgacttggtatcccaaggtcagcttctcaagctgttgggcgacactatc
actgccatggcccttgactgggtaacacttaatgtctactggagcagcaacaagcagcct
cgcctgcaggtcacctctgtcacaggtgcatacacagctgttctcataaaggaaggcatt
aatagagtggagtccatcgccctccacccgcccagtgggagagtttgttatacaaatgtg
gatctgcagggggcaggtaccatggcaacagtagagtgtgccaacatggacggtgctgag
cgaagagtggtgtggaaggatgctgtgcagccgacatctttggtgttctctggtgatgga
gatacaatttattgggctgacactagtttaggaaccattggctcagtcccgattgatgga
tctggatacagagagttgagggctggagatgacctggctactgtggctctgagtgatgac
acactgctctggatgactgtcagtgacaaggccagactctggtacagagaagatcagcag
ccaaagaagttgtggtttgaggttggcacacaagtggtcgccttgaaggcattcagccag
tccagtcagacaggttctaaccagtgcaccgaagacaatggcagctgccagcacctgtgc
ctcgccaccccaacaggtcggacatgcaagtgtgcccatgaccacgtcctcatgaatgat
acccactgcagcccagagcagcactgtccagcaggcagcaggccgtgtctagatcaagcc
tcatgccagcctgttgagaagttctgtaatgggcatgtggactgctctgaccactcagat
gaaaactgtgtcagtctgaagcagtggcctgactcaaaggtctctgctcccaaccagcct
cctagcttcttgccttcctctccctcccctctccctcctctccttggagtctcaggcccg
agtaccactttgaatgacagcagtcagctaatgaacctgcaggcccaggagtgcagcaag
aagcaatgcaacggcaatggacgctgtgtggagattaagggagttcctgcatgtgtgtgt
tcagtgggctacagtggtaattcctgtcaagaccatcgctcgaaaaccatgcagggtccc
atcgtctatggcgccgcaggtgtctgtgggctcgtggtcattactgtgatagcagttttg
gtgaagaggaagagggctgccaacttgaggagaggtggtgcagcagtgaaggagaccagc
atgactgacctggagaacaaagtggaggctcctcccagtaaacagaccaccccagcagat
gcagacaagtcagaggaagcagtatcttctgtggaatga
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