Amphiprion ocellaris (clown anemonefish): 111583166
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Entry
111583166 CDS
T06018
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111583166 (msx1a)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
111583166 (msx1a)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
111583166
NCBI-ProteinID:
XP_023147891
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Position
5:21219110..21222155
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AA seq
283 aa
AA seq
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MAPSTAMSALTAALKSEDLPPRSVLVGRGDMQTSLSPAEETGKPKVAILPFSVEALMADR
KPSREVPSPDAQSVAGTSQALGKGARMGSFGSLDTAAPALPMSSSFSVGDLMNMPEDVLI
KPESPDSKERSSWIQSPRFSPTPPRRLSPPACPLRKHKTNRKPRTPFTTSQLLALERKFR
QKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAFGI
SFPLGAHVPASYAGSHPFQRHSLPVSPVGLYAAHVGYSMYHLA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcgaccgccatgtcagctctgaccgctgctttgaaaagtgaagatctccct
cctcgctcggttctcgtcggcagaggcgacatgcagaccagcctgagccccgcggaggag
accgggaagcccaaagtggcgatcctgcccttcagcgtcgaggcgctcatggctgacagg
aagcccagcagagaggtgccatccccggatgctcagtccgtggccgggacgtcccaggcg
ctggggaaaggcgcacggatgggctcgttcggtagtctggatacagcggctcctgcttta
cccatgagctcctcgttttcagtgggcgacctcatgaacatgccagaagacgtgctgatt
aaacccgagagtccggacagtaaagagagaagttcatggatacagagtcctcgtttttct
ccaacacctccaagaaggttaagtcctcctgcctgtccactgaggaaacacaagacgaac
agaaagccccggactcccttcaccacgtcccagctgctcgccctggagaggaagttccgc
cagaagcagtacctttccatcgcagagcgcgcagagttctccagttctctcaacctgacg
gagactcaggttaaaatctggtttcagaacaggagagccaaggccaagcggctgcaggag
gcagaacttgagaaactgaaaatggcagcaaagcccatgctgcctccggctttcgggatt
tcctttccccttggtgcgcacgtccctgcgtcctacgctgggtcgcacccgttccagagg
cactcgctgccggtttctcccgtgggactgtacgcggctcacgtcggatacagtatgtac
cacctggcttga
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