Amphiprion ocellaris (clown anemonefish): 111583258
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Entry
111583258 CDS
T06018
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
aoce05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111583258 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111583258 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111583258 (srsf2a)
Spliceosome [BR:
aoce03041
]
Common components
Common spliceosomal components
SR proteins
111583258 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_8
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
111583258
NCBI-ProteinID:
XP_023148015
Ensembl:
ENSAOCG00000021878
UniProt:
A0A3Q1C9K1
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All DBs
Position
18:complement(33498432..33501792)
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AA seq
220 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFLDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSMYSRRGAPPRRYGGYGRRSRSR
SASPRRRRRSRSRSRSRSRSRSRSRHHYSRSRSRSYSRSRSRSKSRTPRRSKSKSPSRSR
SRSRSKSRSRTPPSNRGSKSRSRSKSKSRPKSPEDNGAES
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggaaggccgccgccggacgtggaggggatgacctccctgaaagtggacaac
ctcacctaccgaacctcaccggagactctgcgcagagtcttcgagaagtacggtcgggtg
ggagacgtttacatcccccgggacaggtacaccaaggagagccgcggcttcgccttcgtg
cggttcctcgacaagcgcgacgccgaggacgcgatggacgccatggacggcgcgctgctg
gacgggcgggagctgcgggttcagatggcccgctacggaagaccaccggactccatgtac
agccggagaggggctccgccacgcagatacggagggtacggacgcagaagcaggagccgt
tcggccagtccccgccgtcgcaggcgaagccgcagccgctccaggagcagaagccgatcc
cgatccaggagccgccaccactacagccgctccaggtcccgctcctactccaggtcgagg
tctaggtccaagtccagaaccccgcgacgaagcaagtcaaagtctccttccaggtctcga
tcccggtccaggtccaagtcgaggagtcgaaccccgccttccaacagagggtcaaaatcc
aggtccaggtccaaatccaagagtagacctaaatccccagaggacaacggagccgagtct
taa
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