Amphiprion ocellaris (clown anemonefish): 111583459
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Entry
111583459 CDS
T06018
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04080
Neuroactive ligand-receptor interaction
aoce04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111583459 (gabrb1)
04082 Neuroactive ligand signaling
111583459 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111583459 (gabrb1)
Ion channels [BR:
aoce04040
]
Ligand-gated channels
GABA-A
111583459 (gabrb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
aRib
AbrB-like
Motif
Other DBs
NCBI-GeneID:
111583459
NCBI-ProteinID:
XP_054861665
Ensembl:
ENSAOCG00000015280
LinkDB
All DBs
Position
20:5577208..5663296
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AA seq
477 aa
AA seq
DB search
MWITPERGCWGIFCMSLLVTVVCGAQSANEPSNMSYVKATVDKLLKGYDIRLRPDFGGAP
VDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWQGGSNGGSVTGVENIELPQFSIIDYQTLSKKAVFATGSYPRLSLSFK
LKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLP
KIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNEKGRLES
NKVQVDAHGNILLTNLTSEMSGADMMGTLNDPRATMFSYDSASIQYRKPMMSRDLYGRPA
VDRPIGHKKGRLRRRASQLKVKIPDLTDVNAIDKWSRVVFPITFTFFNLVYWLYYVH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtggattactccggaacgcggatgctgggggatcttctgcatgtctctgctcgtcact
gttgtctgcggggcgcaaagcgccaacgaacctagcaacatgtcatatgtgaaagccacc
gtggacaagttgctgaagggctatgacattcgtctgcgtcctgattttggaggcgcccca
gtggatgttggcatgagcatagacatcgccagtattgacatggtatctgaagtcaacatg
gactacaccatcaccatgtatttccagcagtcctggagagacaagcgcctgtcctacaca
ggcattcctctcaacctcaccttggacaaccgggtggcagaccagctgtgggtccctgac
acctacttcattaatgacaagaagtcttttgtccatggggtgacagtaaagaaccggatg
atcagactgcaccctgatggaactgtactctatggtcttaggatcaccactacagctgcc
tgtatgatggacctacgcagatacccactggatgagcagaactgcaccttggaaattgag
agctatggatacaccactgatgatattgagttctactggcagggcgggagcaacggaggc
tcagtcactggggtggagaacattgagctgccccagttctccatcatagactaccagacc
ctctccaagaaagctgtttttgccacaggctcgtacccccgtctctccctgagcttcaag
ctgaagaggaacattggttatttcatcctgcagacctatatgccttccatcttgatcacc
atcctttcctgggtttccttctggataaactatgatgcctcagctgccagagtggcctta
ggtataaccaccgtgctgaccatgaccaccatcaatacccaccttagggagacgctaccc
aagatcccatatgtcaaggccattgacatttacctcatgggttgctttgtctttgttttt
ctggctttgctggaatatgcctttgtcaactacatcttctttggccggggtcctcacctg
cagaagaaggtggcagaaaaggctgccaagtccaacaatgaaaagggcagactggagagc
aacaaagtgcaggttgatgctcatggcaacattctcctgaccaacctcaccagtgagatg
agtggagcagatatgatgggcactctcaatgaccctcgggctacaatgttctcttatgac
agcgccagcatacagtatcgcaagcccatgatgagccgagatctgtatggacggccggca
gttgaccggccaattggtcataaaaagggtcgcttgaggaggagggcttcacagctcaaa
gtcaagatccctgacctcacagatgtcaacgccatagacaagtggtctcgtgttgtgttc
ccaatcacattcactttctttaacttggtctactggctttactatgtccactaa
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