Amphiprion ocellaris (clown anemonefish): 111583726
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Entry
111583726 CDS
T06018
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111583726 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoce03009
]
111583726 (wdr43)
Ribosome biogenesis [BR:
aoce03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111583726 (wdr43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40
Utp12
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
EIF3I
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_WDR41
ASA1
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_ACSF4
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
PEP5_VPS11_N
WD40_2
Beta-prop_SCAP
NBCH_WD40
Paf1
Beta-prop_WDR75_2nd
CFAP251_N
Beta-prop_IP5PC_F
Tricorn_2nd
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
111583726
NCBI-ProteinID:
XP_023148705
Ensembl:
ENSAOCG00000006818
UniProt:
A0AAQ5YGH0
LinkDB
All DBs
Position
20:2245440..2265372
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AA seq
657 aa
AA seq
DB search
MAADGGNASLQLPCVFSPKSRQYLALCAQDGRLRIWNTDSKTLHQEFVPSAHLSATCTCI
AWGPCRTVKEGPQRKKRKSEAVQVEEKADLLAMGTAAGSVLIYSTVKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTNIVEWDLQTGKTRSKWKADRAAVTSLCVSPDGKLLLSAG
QTIKMWDLETKEVYRKFTGHSTAVTTLCFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFTLTDEPQHIDLVASNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTMQMSDTKESPMPIPLLAAALGADTRTVLLAYGNHLQPVMEKVEINTAERHVCLTRDVQ
TSLSLSMETTVSKVKTPIVKANCRVLVPGLPGHQALVKGTSQGSEKRKKDTDTKEMSIAE
RLGEIDLSTVSIEKGAPKGTASLQTDNFAVLLVQGLESNDASILNKVLQTRKEMVIKKTV
ARLPLPAVLPLVEELTKRLQGHPFTAVLIVRWLKAVLMHHTSYLASLPDLVTKLGVLYHM
IESRVKMFHKLTKLHGKLYLLTTQVATSDSSNTVSDVDHTAKLVYEEESSDEDEASGDEG
LPENDSDHWEEEEAMEETVEDNKEEDEDDEDEDPDSRTEPKANGEEDMEHENESEEE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgatggtggtaatgcttcgctgcagctaccctgcgttttttcacctaaatca
cgacagtacttagcactgtgtgcccaggatggcaggcttcgtatttggaacacagatagt
aaaacacttcatcaggagtttgtgccttcagctcatttgagtgccacttgtacgtgcata
gcctggggaccatgccggacagtcaaggaggggcctcagaggaagaagaggaaatcggag
gctgtgcaggtggaggagaaggctgacctgttggcaatgggcacagcagctggcagtgtg
ctcatctacagtacagtgaaaggagcactgcattgtaccctggatggaggccatagtgga
ggagtaaattgtgtccagtggcaccctgaagacagcttattatacagcggctcagacgat
acaaatatcgtagagtgggacctgcagacgggcaagacgagaagtaagtggaaggccgac
cgtgcagcagtgaccagtttgtgtgtgagtcctgatgggaaactgctgctttcagcagga
caaacgattaagatgtgggacttggaaaccaaggaggtttacaggaaattcactggccac
tccactgctgtgacgaccctgtgctttgccaccacgcgacctcctgacagcaacggcctc
tattttctttcaggagctgcacacgatcgactgctcagtgtgtggcaagtacgagaagat
gggaaggacaagaactcggtggtgtccttcacgctgacagatgagccgcaacacatcgac
ctcgttgcgtccaacagcaaggaagaggctgtgaggctggcagtggtgtgtaaggacggg
cagctgcacctctttgagcactttttaaatgggccctgtaagaagcccttgtcaccttcg
tgtacgatgcagatgtcagacacaaaggagtccccaatgccaatccccctgctggcagct
gcgctgggagccgatactcgaactgtcctgctggcctatggcaaccacctacagccagta
atggagaaagtggaaatcaacacagcagagagacatgtgtgcctgacccgagatgttcag
accagcttgtccctctcaatggaaacaaccgtctccaaggtgaaaactccaattgtcaaa
gccaactgtagagtgttggtcccagggcttcctggtcaccaagccctggtgaaaggaacc
tcacagggatcagagaagaggaaaaaagacaccgacaccaaagagatgtcaatagcagag
cggcttggtgaaattgatctgtctacagtctccatcgagaagggagctcctaaagggacg
gcctcattacagacagacaattttgcggtactcctggtgcagggcctggagagcaatgac
gccagcatcctaaataaagttttgcagactcgcaaagagatggtaataaagaagacagtt
gctcggttacccctccctgctgttctgccactggttgaagagctcacaaagaggctccaa
gggcatccttttacggcagttctaatagtgcggtggctcaaggctgtactcatgcaccac
acatcatacctggcatcgctgccagacctggttactaagctgggggtcctttatcacatg
attgagagcagagtgaagatgttccacaagctaacaaagctgcacgggaaactgtatctc
ctaacgacacaggtggcgacaagcgacagcagcaacacggtttcagatgtcgatcacacg
gctaagctggtgtatgaagaggaatcatctgatgaagatgaggcttctggtgacgaaggc
cttcctgaaaacgactctgatcactgggaagaggaggaggcaatggaggaaacagtggaa
gataacaaggaggaggatgaagacgacgaagatgaggatcccgacagcagaacagaaccc
aaagcgaacggagaggaggacatggaacatgaaaacgagagcgaagaagaataa
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