Amphiprion ocellaris (clown anemonefish): 111583733
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Entry
111583733 CDS
T06018
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03030
DNA replication
aoce03410
Base excision repair
aoce03420
Nucleotide excision repair
aoce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111583733 (rfc2)
03410 Base excision repair
111583733 (rfc2)
03420 Nucleotide excision repair
111583733 (rfc2)
03430 Mismatch repair
111583733 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoce03032
]
111583733 (rfc2)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111583733 (rfc2)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111583733 (rfc2)
DNA replication proteins [BR:
aoce03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111583733 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
111583733 (rfc2)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111583733 (rfc2)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111583733 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
111583733 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
nSTAND_NTPase5
RCF1-5-like_lid
AAA_14
AAA_16
Viral_helicase1
AAA_11
Rad17
Mg_chelatase
AAA_19
DEAD
MipZ
nSTAND3
AAA_5
RuvB_N
AAA_assoc_2
AAA_18
AAA_24
ABC_tran
AAA_30
DNAX_ATPase_lid
MeaB
AAA_25
AAA_28
RNA_helicase
NTPase_1
SLFN-g3_helicase
AAA_23
AAA_2
MCM
PPR_1
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
111583733
NCBI-ProteinID:
XP_023148715
Ensembl:
ENSAOCG00000006670
LinkDB
All DBs
Position
8:17718826..17722555
Genome browser
AA seq
352 aa
AA seq
DB search
MDVEMAEKPAESGQKADTDAGEPSSKTSGSAYELPWVEKYRPLKLNEIVGNVETVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGASMKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYSKLTDGQILARLQEVVEKERLSVSDDGLEAVIFTAQGDMRQALNNLQSTNSG
FGYINSENVFKVCDEPHPLLVKSMLGHCVDGNIDEAYKVVEQLWALGYSPEDIIGNIFRV
CKTYQMAEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagatggcggagaaacccgcagaaagcggacagaaggcggacactgacgcc
ggcgagccctcgtcgaagacctccgggagcgcttacgagctgccctgggtggagaaatac
cggccgctcaagctgaacgagattgtagggaacgttgagacagtgagccgactggaggtg
ttcgccagggagggaaacgtccccaacatcatcatagcaggtcctcctggcacaggaaag
accaccagcatcttgtgtttggcccgagctctgctgggagcctcgatgaaagatgccgta
ctggagctcaatgcttcaaacgacaggggaatcgatgtggtgaggaacaagatcaaaatg
tttgctcagcagaaagtcacattgcccaaaggacgacacaagatcatcatcctggacgaa
gcagacagcatgacagacggagctcagcaggcattgaggaggatcatggagatctactca
aagacaacacgcttcgctctcgcctgcaacgcctccgataagatcatcgagccgatccag
tctcgctgtgcggtgctccgttactccaagctcaccgatggacagatcctcgcccggctg
caggaggtggtggagaaggagcgcctgagtgtgtccgatgacggtctggaggctgtcatc
ttcactgcccagggagacatgagacaggcgctgaacaacctgcagtccaccaactccggc
tttggctacatcaacagcgagaacgtatttaaagtgtgcgacgagccccatcctctgctg
gtgaaaagcatgctgggacactgtgtagacgggaacatcgacgaggcctacaaagtggtg
gagcagctgtgggctctgggctactctccagaggacatcatcggaaacatctttagggtc
tgcaagacctaccagatggcagagtacctcaaactggagttcatcaaggagattggctac
acccacatgagggtggctgagggcgttaactccctgctgcagatggctggtctgctgggt
cgactctgcagcaagacggcgccccctgctgccagctga
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