Amphiprion ocellaris (clown anemonefish): 111584027
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Entry
111584027 CDS
T06018
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04510
Focal adhesion
aoce04512
ECM-receptor interaction
aoce04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111584027 (lamc1)
04518 Integrin signaling
111584027 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111584027 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
EGF_Teneurin
Death
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
111584027
NCBI-ProteinID:
XP_023149046
Ensembl:
ENSAOCG00000021888
LinkDB
All DBs
Position
10:33511197..33602641
Genome browser
AA seq
1595 aa
AA seq
DB search
MPSLIRALVAWSLVAAVCVRAAMDECSDEQGRPQRCMPEFVNAAFNVTVAATNTCGSPPE
EYCVQTGATGVTKSCHICDARDPRNHHSAVYLTDYNNQQETTWWQSQTMLAGIQYPNSIN
LTLHLGKTFDITYVRLKFHTSRPESFAIYKRSSEGAPWVPYQYYSGSCEKTYQKASRGFI
RTGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDHSPVLQDWVTATDIRVTLN
RLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECLKNGGGRLVCNCKHNTEGD
DCNVCKPFFNDRPWRRATADNANECLACNCNGKSSECYFDAELYRATGHGGHCRNCADNT
DGPNCERCLDYYYRDQSGSRCLPCSCNSVGSESPQCDNRGVCACKPGVTGEKCDRCQPGF
HSLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGYFNLDPNNPQGCTA
CFCFQHSSVCDSAEGFSVHAVTSSFSRDDEQWTAQQRDGSSVSVQWSPSGQEISLISDDY
FPMYFVAPEKFLGNHMLSYGQNLTLNFRVDRRDTRLSAEDLVLEGADLRVAVPLIAQGNA
YPNENMQTYVFRLHDSTDYPWRPSISHSDFQKLLHNLTAIKIRGTYSERSAGYLDDVSLV
TARRGPGVPARWVEQCTCPQGYQGQHCEQCTLGYRRAQPKLGAFSSCEPCNCNAHSDACN
ADTGACDCQHNTAGLSCERCKDGFYGDATQGTSADCKPCPCPAGATCAVVPKTREVVCTN
CPAGTTGKRCELCDDGFFGDPLGQSGPVRACRACKCSDNIDPNAVGNCNRETGECLKCIY
NTDGFFCDRCKEGFYGNALAANSADKCKPCSCSPLGTVGRQTGCSQVTGQCQCLPNVAER
DCSICQPGFFNLQSGNGCERCNCNPIGSTNGQCDITSGQCECQPGVTGLHCERCEGNFFG
FSSSGCKPCDCDPEGSQSGQCKEDGRCECRPGFVGARCDMCEENYFYNRSAPGCQQCPSC
YSLVRDKVNQQRQKLHDLQTLIDNLGSGQETVSDKAFEDRLKEAERAIMELLEEAQTSKD
VDRGLLDRLNGINSTLTTQWNRLQSIRNTVDDTGTQADRARSRVRDAESLIDRARQELDK
AKDAVGKVDIKPPGGGTEPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKAYNL
LLKTLDGEGKTSQEIEELNKKYNEAKELAKNLEKQANKVKAEAEDAGDKALKLFANLTSL
PVFDTKALEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLKPKELEVRKLLEKGKSEQQT
ADQLLARADAAKALAEEAAKKGRSTFKEAENILDDLRDFDKRVNDNKTAAEEAMKKIPII
NATIMAANEKTRQAEAALGNAAADAREAKNKAEEAERIASNVQKGSAKTKEDAEKAFKDT
NKLDDEIDNMIEQLSAAEQQLAKKKAEADNDMMMAGMASDNAKEAEDNARKAKSTVKTVL
KIITNLMDQLGNIDKVDLSKLNQIDESLKKAKGKMADSDLDKKLAELNDVAKTQEDMIND
YDRQIREIRADITNLNDIKNTLPEGCFNTPSLEKP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtttgatccgggctctggtggcctggagcctggtggcggcggtgtgtgtccgc
gccgccatggacgagtgttcggacgagcagggccgcccgcagcgctgcatgccggagttc
gttaacgccgcgttcaacgtgacggtggcggcgaccaacacctgcggctctccgcccgag
gagtactgcgtccagaccggcgccaccggggtcaccaagtcctgccacatctgcgacgcc
cgggacccccggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcaggag
accacctggtggcagagccagaccatgctggccgggatccagtacccgaactccatcaac
ctcaccctgcacctcggtaaaaccttcgacatcacctacgtccggctcaagttccacacc
agccggccggagagcttcgccatctacaagcgcagcagcgagggcgccccctgggtcccc
taccagtactacagcggctcctgtgagaaaacctaccagaaggcgagccgcggcttcatc
cggaccggcgaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccg
ctcaccggaggaaacgtggcgttttccaccctggagggccgaccgagcgcctacaacttc
gaccacagccccgtcctgcaggactgggtgacggccaccgacatcagagtgaccctgaac
aggctcaacacgttcggagacgaagttttcaacgaccccaaggtcctcaagtcgtactat
tacgccatctccgacttcgccgtgggcggaaggtgtaagtgtaatggccatgccagcgag
tgcttgaagaacggcggagggcgtctggtgtgtaactgcaaacacaacaccgagggcgac
gactgcaacgtgtgcaaaccgttcttcaacgatcggccgtggaggagggcgacggccgac
aacgccaacgagtgtctggcctgcaactgtaacgggaagagctctgagtgctacttcgat
gccgagctgtaccgagccaccggacacggaggccactgcaggaactgcgccgacaacacc
gacgggccgaactgcgagcgttgcctcgactactactaccgagaccagagcggcagccgc
tgcctgccctgcagctgcaacagcgttggctcagagtctcctcagtgcgacaacagagga
gtctgtgcttgtaaaccaggagtgaccggagagaagtgcgaccgatgccagccgggattc
cacagcctgaccgaggccggctgcaggccttgttcctgctctccgtccggcagcacgcag
gaatgcgacgtcaacaccggacagtgtcgctgcaaagacaacgtggagggcttcagctgt
gacaggtgtaaactgggctacttcaacctggaccccaacaaccctcagggctgcaccgcc
tgcttctgcttccagcactcgtcggtgtgcgacagcgccgagggcttcagcgtccacgcc
gtcacctcgtccttcagcagagatgacgaacagtggacggctcagcagcgggacggatcc
agcgtctcggtccagtggtcgcccagcggacaggaaatctccctcatctcagacgactac
ttccccatgtacttcgtcgctccagagaagttcttggggaaccacatgctgagttatgga
cagaacctgacgctgaacttccgggtggaccgacgcgacacccgtctgtcggccgaggat
ctggttctggagggagccgacctgcgggtcgccgtgccgctcatcgcccagggcaacgcc
tatcccaacgagaacatgcagacatacgtgttcaggctccatgacagcacagattacccc
tggaggccgtccatcagtcactccgacttccagaaacttcttcacaacctgacagccatc
aagatccgcggcacctacagcgagaggagtgctggttacctggacgacgtctccttggtg
acggccaggcggggtccaggtgtgccggcccgctgggtggagcagtgcacctgtcctcag
ggttaccaggggcaacactgtgagcagtgcactctgggataccgccgggcccaacccaaa
ctcggagccttcagctcctgtgagccctgcaactgcaacgcacacagcgacgcctgcaac
gcggacactggtgcatgtgactgtcaacacaacacggccgggttgagctgtgagcgttgt
aaggacggtttctacggcgacgccacccaggggacgtcagctgactgtaaaccgtgtccc
tgtccggccggagccacctgcgccgtcgtcccaaagaccagggaggttgtttgtaccaac
tgtcccgccggaaccacaggtaaacgttgcgagctctgcgacgacggcttcttcggcgac
ccgctgggtcagagcggaccggtccgtgcctgccgggcctgcaagtgcagcgacaacatc
gaccccaacgccgtcggcaactgcaaccgcgagaccggagagtgcctcaagtgcatctac
aacactgacggcttcttctgcgaccgctgcaaggagggtttctacggcaacgcgctggcc
gccaactccgcagacaaatgcaaaccttgttcctgctctccgttggggacggtgggtcga
cagaccggctgttctcaggtcaccggtcagtgtcagtgtcttcccaacgtggccgaacgc
gactgcagcatctgtcagcccggattcttcaacctacagagcggcaacggctgcgagcgg
tgtaactgtaatccgattggctccaccaacggtcagtgtgacatcaccagcggtcagtgc
gagtgtcagccgggcgtcaccggactccactgcgaacgctgcgaaggcaacttcttcggc
ttcagctcgtctggatgcaaaccttgtgactgcgaccctgaaggctcccagtcgggtcag
tgtaaggaggacggtcgctgcgagtgtcggcctggatttgtgggagctcgctgcgacatg
tgtgaggagaattacttctacaaccgctcagcgccgggctgccagcagtgtccgtcctgc
tacagtctggtccgggacaaggtgaaccagcagaggcagaagcttcacgacctgcagact
ctgatcgacaacctgggctcgggtcaggagaccgtcagcgacaaggccttcgaggaccgg
ctgaaggaggcagagcgagccatcatggagctgctggaggaggctcagaccagcaaagat
gtggaccgcggcctgctggaccgactcaacggcatcaacagcactctgaccacacagtgg
aaccggctgcagagcatccgcaacacggtggacgacaccggaacgcaggccgaccgggcc
cgaagccgagtccgcgatgctgagagcctgatcgaccgagcccggcaggagctggacaag
gccaaggacgccgtaggcaaagtggacatcaaacctcccggcggcggcacagaacccaac
aacatgacgctgctggctgaggaggctcgaaacctggccgacaaacacaagatggacgcc
gaccagattgagaagatcgccaaagacgccaacgacacgtcgaccaaagcgtacaacctg
ctgctgaaaactctggatggagaaggaaagacgagccaggagatcgaagagctcaacaag
aagtacaacgaggcgaaggaactggccaagaatctggagaaacaggccaacaaggtgaag
gccgaggctgaagacgctggagacaaagctctgaagctgttcgccaacctgaccagcctc
ccggtgttcgacaccaaggccctcgaggacgaagccagtaagatcaagaaggaggcgtcg
gatctggacaagctgattgataagacggagaaggaatacaacgacctgagagacgacctg
aagcctaaagagctggaagtccgcaagctgctggagaagggcaagagtgagcagcagact
gcagaccagctgttggctcgagccgacgctgccaaagctctggccgaggaggcggcgaag
aaaggccggtcgacattcaaggaggctgagaacatcctggacgacctgagagacttcgac
aagagagtcaatgacaacaagacggcggctgaggaagccatgaagaagattcccatcatc
aacgccaccatcatggccgccaacgagaagacgaggcaggcggaggcggcgctcggaaac
gccgccgccgacgcccgggaggccaagaacaaggcagaggaggcggagcggattgccagc
aacgtgcagaagggatccgctaagaccaaagaagacgcagagaaggcttttaaagacaca
aacaaactggacgatgaaatcgacaacatgatcgagcagctgagcgccgccgagcagcaa
ctggccaagaagaaggccgaagcagacaacgacatgatgatggcaggaatggcatcggat
aacgcgaaggaggccgaggataacgcccgcaaggccaagagcaccgtgaagacggtcctg
aagatcatcacgaatctgatggatcaactcggaaacatcgacaaagtggatctgagcaaa
ctgaaccagatcgacgagtccctgaagaaggcgaagggcaagatggccgacagcgatctg
gacaagaagctggcggagctgaacgacgtggccaagacccaggaggacatgatcaacgac
tacgaccggcagatccgcgagatccgcgcagacatcaccaacctcaacgacatcaagaac
acgttaccagaaggctgcttcaacacgccatctctggagaagccttag
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integrated database retrieval system
