Amphiprion ocellaris (clown anemonefish): 111584149
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Entry
111584149 CDS
T06018
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111584149 (lingo3a)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
111584149 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_9
Ig_2
LRR_LRWD1
LRRNT
LRR_RPS2
LRR_6
V-set
Cupin_1
Ig_C17orf99
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
111584149
NCBI-ProteinID:
XP_023149171
Ensembl:
ENSAOCG00000028419
UniProt:
A0AAQ5Y9D7
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Position
2:complement(39735961..39773504)
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AA seq
610 aa
AA seq
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MGVSLDQDVGWLLPFLFLLLMITVSPAQSQSCPQRCDCIAKLKTVSCFGKRLSALPDGIP
SDTKILDLSGNKLRWVEHGDLLPFPRLEKLDLSDNMISVLEPNAFSSLQNLQSLSLKGNQ
LKLVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGL
VGLRELTIERCNLTSVSSQSLSYLHNLATLRLRYLSISALEDQNFRKLGNLRGLEINNWP
FLEYISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRDL
IRLKELHLVNTNLVVVQPYALGGLRQIRLLNLSTNSLVTLEEGAFQSVNTLETLRLDGNP
LACDCRLLWILQRRKTLNFDGASPVCMTPVEVQGRALNAFSDSALFDHFTCQKPKIRNRK
LQQISAREGQVVSFICRAEGEPTPIIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVM
DSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgagcctggaccaggatgtaggctggctcctgcctttcctgttcttgttgctt
atgatcacagtgtcgcccgcccaaagccaaagttgtccccagcgttgcgattgcattgcc
aagctcaagactgtgtcctgttttggcaaacgtctatctgcactgccagacggaatccca
tctgacaccaagatcctggacctgagtgggaataaacttcgctgggtcgaacacggtgac
ctgcttccatttccgcgtcttgaaaagctggacctgagtgacaacatgatcagcgtcctg
gaaccaaatgctttttctagtctccaaaacctgcagtcactttcgctgaagggtaaccag
ctgaaactcgtccccatgggggccttctcacgactctccaacctgacgtcactggacctc
agtggaaataagattgtaattcttttagactttactttccaggacttgaaaagtctaaag
aacttggaggttggagacaatgatcttgtttatatttccaacaaggcctttttgggtcta
gtgggactaagggagttgaccattgagaggtgcaacctgacttcagtgtccagccagtct
ttgtcttacctgcataacctggcgactctgcggctccgctacctcagtatctccgcctta
gaggaccagaacttccggaaattggggaacctaaggggccttgagattaataactggccc
tttttggagtacatttcccctcacagcctgcagggtctcaacttgtcttggttgtctatt
acgcacaccaacatcacctccgtgcccacctctgccctgcgcagcctggctcacctcacc
agcctcaacctttcctacaaccccatctctgtgctggagtcctgggcgctgcgggatcta
atccggctgaaagagctacatctagtcaacactaacctggtagtggtgcagccatacgca
cttggtggtttgagacaaatccgccttcttaacctttccactaacagcctggtgaccctg
gaggagggagccttccagtcagtcaacactctggagacacttcgtttggatggaaaccct
ctggcctgtgactgccgcttgctctggatccttcagcgcaggaagaccctcaattttgat
ggcgcctccccagtgtgcatgacacctgttgaggtgcagggacgggctctcaacgcgttc
tccgactcagctctctttgaccactttacttgccagaagcccaaaattcgcaacaggaaa
ctgcagcagatatctgcccgtgaggggcaggtggtgtcgttcatttgcagagcagaaggt
gagccgacacccataatattctggatttctcctcagcgccgccgcatcaccacaaagagc
agtggccgcctaactgtgttgccagaaggcacgttagaaatacggtacgcccaggtaatg
gatagtggaacttacatctgcattgctagcaacgctggtgggaatgacacctattttgcc
acacttacagtgagtgggctgccgctggatgcagccctcatggccaaccgtacctactat
gccggggatcttaatgacacaaatctgaatgataccagagtcttcttgaagtttactctg
gacctcaagaccatcctcatatctacagcgatgggctgtatcatgtttctgggagtggtc
ctgttctgtttcattctgctgtttgtgtggagtcgaggcagagggcagcacaaaaacaat
ttctcagtagaatattctttcagaaaagtggatggacccgcagccagtggaggacaaggt
ggagcacgcaagttcaacatgaaaatgatttga
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