Amphiprion ocellaris (clown anemonefish): 111584428
Help
Entry
111584428 CDS
T06018
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X3
KO
K08532
RAR-related orphan receptor alpha
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111584428
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aoce03310
]
111584428
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111584428
Nuclear receptors [BR:
aoce03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
111584428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Med3
MIOS_a-sol
Motif
Other DBs
NCBI-GeneID:
111584428
NCBI-ProteinID:
XP_023149351
Ensembl:
ENSAOCG00000002610
UniProt:
A0AAQ5X4J6
LinkDB
All DBs
Position
1:complement(35495118..35648493)
Genome browser
AA seq
499 aa
AA seq
DB search
MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCL
IDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQQQQQQ
QQQQQQQQGSVLLSRPSIGSPSPGEAESLSPQYTLSSSGLTELPDKAGRFLEQDSPEGGS
LSSKADSGGGGGDGGGFYLDIQPSPDQSGLDINGIKPEPLCDYGSSNGFFPYCSFSNGDA
SPTVSMAELDHLVQIISKSHLETCQYLKEELQQMSWQSFEQDEVETYQSKPREVMWQLCA
VKITEAIQYVVEFAKRIDGFMDLCQNDQIVLLKAGSLEVVLVRMCRAFDSQNNTVYFDGK
FAGPDAFKALGCDDLISSVFDFAKSMSSLHLSEDELALFSAFVLLSADRSWLQEKLQVEK
LQQKTQLALQHVLQKNQREDGVLNKLRAKVSALRSLCSRHTEKLSAFRAVYPDIVRSHFP
PLYKELFGADLELALQTSD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtcatttctgccatgaaagctcaaattgaaatcatcccctgtaagatctgt
ggagataaatcatcagggatccactacggagtgatcacctgcgagggctgcaagggcttc
ttcagacggagtcagcagagtaacgccacctactcgtgtcctcgccagaaaaactgtctg
atcgaccgaacgagccggaaccgctgccagcactgccgtctgcagaaatgtctggctgtg
ggaatgtcccgagacgctgtaaagtttggtcgcatgtctaagaagcagcgggacagtttg
tacgctgaggtccagaagcatcgtctccagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagggatccgtcctcctgagccgacccagcatcggcagc
ccgagtcctggggaggccgagtctctgtccccccaatacacgctgtcctccagcggcctc
acggagctgcccgacaaggccggacgcttcctggagcaggactcacctgagggaggctct
ctgtcatccaaggccgactctggtggaggaggaggagacggtggaggtttctacctggac
atccagccgtctcctgaccaatcagggctcgatattaatggcatcaaaccggagccgctg
tgcgactacgggtccagtaacggattcttcccgtactgttccttcagcaacggagacgct
tcgcctacagtgtccatggctgaactcgatcacctggtccagatcatctccaagtctcac
ctggagacgtgtcagtacctgaaggaggagctgcagcagatgagctggcagagcttcgag
caggacgaggtggagacgtaccagagcaagccgagggaggtgatgtggcagctgtgtgcc
gtgaagatcaccgaggccatccagtacgtggtggagttcgccaaacgcatcgacggcttc
atggatctctgccagaacgaccagatcgtcctgctgaaggctggttctctggaggtcgtc
ttggtacgaatgtgtcgggcgtttgactcccagaacaacacggtttacttcgatggaaag
ttcgcaggtcctgatgccttcaaagctttagggtgtgatgatttgatctcgtcggtgttt
gacttcgctaagagcatgtcttcgctgcacctgtccgaggacgaactcgctctgttctca
gcgttcgttctgctttctgccgatcggtcgtggctgcaggagaagctgcaggtggagaag
ctgcagcagaaaactcagctggctctgcagcacgttctgcagaagaaccagagggaagac
ggagttctcaacaagctcagagcgaaggtgtcggcgttgcgttctctctgcagtcgccac
acagagaagctctcagcgttcagagcagtttatcccgacatcgttcgatcacacttccct
cctctgtacaaggagctgttcggagccgacctggaactcgctctgcagaccagcgactga
DBGET
integrated database retrieval system