KEGG   Amphiprion ocellaris (clown anemonefish): 111584428
Entry
111584428         CDS       T06018                                 
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X3
  KO
K08532  RAR-related orphan receptor alpha
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aoce03000]
    111584428
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:aoce03310]
    111584428
Transcription factors [BR:aoce03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    111584428
Nuclear receptors [BR:aoce03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   111584428
SSDB
Motif
Pfam: zf-C4 Hormone_recep Med3 MIOS_a-sol
Other DBs
NCBI-GeneID: 111584428
NCBI-ProteinID: XP_023149351
Ensembl: ENSAOCG00000002610
UniProt: A0AAQ5X4J6
LinkDB
Position
1:complement(35495118..35648493)
AA seq 499 aa
MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCL
IDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQQQQQQ
QQQQQQQQGSVLLSRPSIGSPSPGEAESLSPQYTLSSSGLTELPDKAGRFLEQDSPEGGS
LSSKADSGGGGGDGGGFYLDIQPSPDQSGLDINGIKPEPLCDYGSSNGFFPYCSFSNGDA
SPTVSMAELDHLVQIISKSHLETCQYLKEELQQMSWQSFEQDEVETYQSKPREVMWQLCA
VKITEAIQYVVEFAKRIDGFMDLCQNDQIVLLKAGSLEVVLVRMCRAFDSQNNTVYFDGK
FAGPDAFKALGCDDLISSVFDFAKSMSSLHLSEDELALFSAFVLLSADRSWLQEKLQVEK
LQQKTQLALQHVLQKNQREDGVLNKLRAKVSALRSLCSRHTEKLSAFRAVYPDIVRSHFP
PLYKELFGADLELALQTSD
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgtattttgtcatttctgccatgaaagctcaaattgaaatcatcccctgtaagatctgt
ggagataaatcatcagggatccactacggagtgatcacctgcgagggctgcaagggcttc
ttcagacggagtcagcagagtaacgccacctactcgtgtcctcgccagaaaaactgtctg
atcgaccgaacgagccggaaccgctgccagcactgccgtctgcagaaatgtctggctgtg
ggaatgtcccgagacgctgtaaagtttggtcgcatgtctaagaagcagcgggacagtttg
tacgctgaggtccagaagcatcgtctccagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagggatccgtcctcctgagccgacccagcatcggcagc
ccgagtcctggggaggccgagtctctgtccccccaatacacgctgtcctccagcggcctc
acggagctgcccgacaaggccggacgcttcctggagcaggactcacctgagggaggctct
ctgtcatccaaggccgactctggtggaggaggaggagacggtggaggtttctacctggac
atccagccgtctcctgaccaatcagggctcgatattaatggcatcaaaccggagccgctg
tgcgactacgggtccagtaacggattcttcccgtactgttccttcagcaacggagacgct
tcgcctacagtgtccatggctgaactcgatcacctggtccagatcatctccaagtctcac
ctggagacgtgtcagtacctgaaggaggagctgcagcagatgagctggcagagcttcgag
caggacgaggtggagacgtaccagagcaagccgagggaggtgatgtggcagctgtgtgcc
gtgaagatcaccgaggccatccagtacgtggtggagttcgccaaacgcatcgacggcttc
atggatctctgccagaacgaccagatcgtcctgctgaaggctggttctctggaggtcgtc
ttggtacgaatgtgtcgggcgtttgactcccagaacaacacggtttacttcgatggaaag
ttcgcaggtcctgatgccttcaaagctttagggtgtgatgatttgatctcgtcggtgttt
gacttcgctaagagcatgtcttcgctgcacctgtccgaggacgaactcgctctgttctca
gcgttcgttctgctttctgccgatcggtcgtggctgcaggagaagctgcaggtggagaag
ctgcagcagaaaactcagctggctctgcagcacgttctgcagaagaaccagagggaagac
ggagttctcaacaagctcagagcgaaggtgtcggcgttgcgttctctctgcagtcgccac
acagagaagctctcagcgttcagagcagtttatcccgacatcgttcgatcacacttccct
cctctgtacaaggagctgttcggagccgacctggaactcgctctgcagaccagcgactga

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