Amphiprion ocellaris (clown anemonefish): 111584438
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Entry
111584438 CDS
T06018
Symbol
lamb1b
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04510
Focal adhesion
aoce04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111584438 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111584438 (lamb1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
111584438
NCBI-ProteinID:
XP_023149352
Ensembl:
ENSAOCG00000010302
LinkDB
All DBs
Position
21:2675263..2717212
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AA seq
1779 aa
AA seq
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MSLIIRILTTLALWSPVRAMLPEFSDVCTEGSCYPATGDLLIGRAHKLSASSTCGLYEPE
RFCIVGHLEEEKKCFECDSSQMYDEDSNTVSHTIENVVTTFAPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMIIERSMDFGKSWQVYRYFAYDCETSFPGISSGPM
VKVDDIICDSRYSDIEPSTEGEVIFRVLDPAFEIEDPYSLRIQNMLKITNLRVKFIKLHT
LGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASECAPMDGAPTGAEGMVHGRCVCNH
NTEGLNCEHCQDFYHDLPWRPAEGRNTHACKKCECNQHSTSCHFDLAVYMTTANVSGGVC
DDCQHNTVGRQCEQCAPFFYQHPNRDLRDPNVCEPCNCDPAGSLQGGLCDSRTDVAAGLI
SGQCRCKASVEGERCGHCRQGYYGLGEGPDGCLPCTCNPLGTLPGGNSCDSDTGSCFCKR
LVDGQNCDQCLPQHWGLSNDMDGCRPCDCDQGGAVNNNCDPHTGQCECREHMFGRRCDEV
ESGFYFITLDHYTYEAEDAKHGPGVTVVPRPYPLDRSPTWTGMGFVNVPEGAYLEFNIND
IPESMDYDILIRYEPQLPEQWEQVNVRVQRPVFNPPNYSSHCSNSIQSGDEQSISLPPGS
RHVLLVRPVCFEKGLNYTVRLSLPLYSSVTDVQSPYTLIDSLVLMPRVRELDMFHGVDGE
GAWDTFQRYRCLESSQSVVKSPMTDICNDYIFSVSALLHKGAMACQCDPQGSLSSMCDPS
GGQCRCRPNVVGRNCDHCAPATFLFSPAGCRPCECDLRGSVSAFCHESTGQCRCVQGAMG
RQCSHCKPGFWGFPQCRPCQCNGHSEYCHPQTGECQGCRDFTSGRHCERCLAGYHGDPQL
DSGDHCRPCMCPDGPRSGRQFADSCYLLHNTNQLVCVCSPGYKGARCAECAPGHYGNPQV
PGGRCMPCECNNNIDMHDPGSCDVRTGACLKCLYHTQGYGCQHCKLGYYGDAATQSCRKC
MCYSVGTVPQACSSPDECQCDQRSGRCPCQPNVVGPNCDRCAADTWNIASGTGCQRCDCD
PVHSVGSSCHEITGQCVCKPGFGGRTCRECKELFWGDPEVKCHACDCDLRGISSPQCHRA
TGQCSCVEGVSGPKCDQCARGSQGEFPHCQPCHQCFAVWDAVVGELTNQTRRLEAQVTEL
QTSGVTVPYKELVSSLEKNAKAVREIVENNPAAMKLEQIQDLMHQIIGLMSYLNGKLNTT
EENLDLLHGDANATDANLDALTDEANQLQQSIQELRQQVYNIKNTNIQGAMDTISAAQMQ
SREAELRSKAATTDPGNTVETSAQVRKATEDKLSSSQKEFDRKHQRNTQKLDKLSKEMDK
FDLSPLSEKTCGGAAAEGDGCSSCGGLGCVLEDGAPQCGAEDCKGLVTSSQTALKSANSL
DQEILAAMQEVDKLSRMVWEANVRANEAKANALEVLIKSNRSKERVEESNEQLRNLIKEI
RDLLTNEKADASVIEAVANEVLALQMPTSAEKLNELTKEIREKVGALTSVETILSQSAED
IQTAESLLKEAKAASEEASNMKDTADVVKAALDEAERAQNIAMDAIQLAQNNTKGTLDLL
ISVESETAESELKLSDTTSRLVQLEREVGLLRQNNLEVKLLVDRADHMTEEALQDAEEAQ
REFDEELKDKLEAVEDEVEDKGEAVLQARRRADELQQEAKELLAQSSIKLQRLGELEVSY
EANQRILEAKAAELAELERSARRILDQISHKVTLYSTCL
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcataatccgcattttaaccactttggccctgtggagtcctgtcagggcgatg
ctgcctgagttttcagatgtttgcacagagggcagctgctatccggccaccggtgacctg
ctgatcggccgagcgcacaaactcagcgcctcctccacctgcggcctctacgagccggag
cgcttctgcatcgttggacatctggaggaggagaagaaatgcttcgagtgtgactccagc
cagatgtacgatgaggacagcaacaccgtcagccacaccatcgagaacgtggtcaccacc
ttcgcccccaaccgcctcaagacctggtggcagtcggagaacggtgtggagaacgtgacc
atccagctggacctggaggccgagtttcatttcacgcacctcatcatgaccttcaagaca
tttcgtccagctgctatgatcatcgagcggtccatggactttgggaaatcatggcaggtt
tatcgctactttgcctacgactgcgagacgtccttccctggtatttcctctggacccatg
gtcaaagtggacgacatcatctgtgactcccgatactcggacatcgaaccatcgacagag
ggagaggtgatatttcgggtgctggaccctgccttcgagattgaggacccctacagcctg
aggatacagaacatgctgaagatcaccaacctgcgagtgaagttcatcaagctccacacg
ctgggagacaacttgctcgactcccgcgatgaggtgacggagaagtactactacgccctc
tacgacatggtggttcgtggaaactgcttctgctacggccacgcctccgaatgcgccccg
atggatggagcgccgactggagctgaggggatggtccacggccgctgtgtttgcaaccac
aacactgagggactgaactgcgaacactgccaggacttttaccacgatttgccctggaga
cctgcagagggacgaaacacccacgcctgcaagaagtgtgagtgcaaccagcactccaca
tcgtgtcacttcgacctggccgtctacatgacgaccgccaacgtcagcggaggcgtttgc
gacgactgtcagcacaacacggtgggccgacagtgtgagcaatgtgcaccgttcttctac
cagcaccccaaccgagacctgagggaccccaacgtctgtgaaccatgtaactgtgacccg
gccgggtctctgcaaggtggactgtgtgactcccggaccgatgtggccgccgggctgatc
tcaggtcagtgtcgctgcaaagccagtgtggagggagaacgctgcggccactgcagacag
ggatactacgggctgggagaaggaccagacggctgcctgccttgtacctgtaacccgctg
ggaacgctgccgggaggaaactcctgtgattcagacacaggaagttgcttctgcaaacgg
cttgtcgacggacaaaactgtgatcagtgtctgccgcagcactggggtctgtccaatgac
atggacggctgcagaccatgtgactgtgaccagggtggagctgtcaacaacaactgtgac
cctcatacaggacagtgtgaatgcagggagcacatgtttggacgccgctgcgatgaggtg
gagtctggcttctacttcatcactctggatcactacacttacgaagctgaggatgcaaag
cacggacctggagtgacggtggtaccgaggccttatcctctggatcgcagtcctacatgg
actggcatgggatttgttaacgtgccagaaggagcctatctagagttcaacatcaacgac
atcccagagtccatggactatgacatcctcatacgatatgagccacagttaccagagcag
tgggagcaggtgaatgtccgagtgcagcgtcccgtcttcaaccctccaaactactccagc
cactgcagcaactccatccagagcggagacgaacagtccatctctcttccacctggatcc
aggcatgtgctgctggtgaggccagtgtgcttcgagaaaggactgaactacacggtccga
ctcagtctgccgctctactcgtcagtcactgacgtccagagcccgtacacactcatcgac
tcgctggtgctgatgccccgagtcagggagctggacatgttccatggggtcgatggtgaa
ggagcgtgggatacgtttcagcgctaccgatgtctggagagcagccagagcgtcgtcaaa
agccccatgactgacatctgcaacgactacatcttcagcgtctctgctctgctgcacaaa
ggagccatggcctgccagtgtgaccctcagggttctctcagcagtatgtgtgatcccagc
ggaggtcagtgcagatgtcgacccaacgttgtgggcaggaactgtgaccactgtgctccg
gctaccttcctgttcagccccgccggctgcagaccttgtgagtgtgaccttcggggctcg
gttagcgccttctgccacgaatcgaccggccagtgtaggtgtgtccagggggcgatgggt
cgacagtgttcccactgcaagccgggtttctggggtttccctcagtgccgaccgtgccag
tgtaacggccacagcgagtactgccaccctcagactggagagtgtcaaggctgcagagac
ttcacctccggacgccactgtgagaggtgtctggccggttaccacggcgacccacagctg
gattcaggtgaccactgtcgcccttgcatgtgtccagacgggccacgcagcggacggcag
tttgcagacagctgttacctcctacataacaccaaccagctggtgtgtgtgtgcagtccc
ggctacaaaggtgccaggtgtgctgagtgcgccccgggtcactatgggaaccctcaggtg
cccggcggccgctgcatgccctgcgagtgcaacaacaacatcgacatgcacgacccgggc
tcctgcgacgtccgcacgggtgcctgccttaaatgcctgtaccacacccagggctacggg
tgtcaacactgcaaactgggttactatggcgacgctgccacacagagctgcaggaagtgc
atgtgctactcggtggggacggtacctcaggcctgttcgtcccctgatgagtgtcagtgc
gaccagaggagcggtcggtgtccctgccagcccaacgtggtcggtccgaactgcgaccgc
tgcgctgctgatacgtggaacatcgccagcggaaccggctgccagcgctgcgactgcgac
cccgttcactccgtcggatcctcctgccacgagatcacaggacaatgtgtttgcaaacca
ggcttcggtggacggacgtgtcgggagtgcaaagagctcttctggggggatccagaggtc
aaatgtcacgcttgcgactgtgatcttcggggaatctccagccctcagtgccatcgtgcc
accggtcagtgctcctgtgtggagggagtgtctggtcccaagtgtgaccagtgtgccaga
ggctcccagggcgagttcccccactgccagccctgccaccagtgcttcgccgtctgggac
gccgtggtgggcgagctgaccaatcaaacccgacgtctggaggcccaagtgacggagctc
cagaccagcggagtgacggttccctacaaagagctggtcagcagcctggagaagaacgcc
aaagctgtcagagagatcgtggagaacaaccctgcagcgatgaagctggagcagatacag
gacctgatgcaccagattattgggctgatgtcttacctcaacgggaagctgaacaccact
gaggagaacttggaccttctccacggtgacgccaacgccaccgatgcaaacttggatgcg
ctgactgatgaggccaaccagctgcagcagagcatccaggagctgaggcagcaggtgtac
aacatcaagaacaccaacatccaaggagccatggacaccatttctgctgcacagatgcag
tccagagaagcagaacttcgctccaaagctgccaccactgatcctggcaacacagtagag
acttcagcccaagtacggaaagccacagaggacaaactgagcagcagtcaaaaggaattc
gaccgaaagcaccaaagaaacacacagaagctggacaagctgtccaaagaaatggacaag
tttgacctgtctccactcagtgagaagacgtgtggtggagcagcagctgaaggtgacggc
tgctcttcctgtggtgggttgggttgtgtcttggaggacggagcgcctcagtgtggagca
gaagactgcaaaggcctcgtcaccagctctcaaaccgctctcaaatcagccaacagcctg
gaccaggagatcctggcagccatgcaggaggtggacaagctctccaggatggtgtgggaa
gccaacgtccgtgcaaacgaagccaaggccaacgctttggaggttctgatcaaatccaac
cggagcaaggagagagtggaggagagcaacgagcagctccggaacctgatcaaggagata
cgagacctgctgaccaatgagaaggccgatgcgtccgtgatcgaagccgtggccaacgag
gtgctggctctgcagatgccgacctcggcggagaagctgaacgagctgaccaaagagatc
agggagaaggtcggagctctgaccagcgtggagacgatcctcagtcagagcgccgaggac
atccagacggccgagtcgctgctgaaggaggctaaagctgccagcgaggaggcgtccaac
atgaaggacacagcagacgtggtgaaggcggctctggacgaagctgagcgcgctcagaac
atcgccatggacgccatccagctggctcagaacaacactaaaggcaccctggacctgctg
atctctgtggagtctgagacggccgagtcggagctgaagctcagcgacaccacgagtcgc
ctggtgcagctggagagggaggtggggctgctgaggcagaacaacctggaggtgaagctg
ctggtggacagggccgaccacatgacggaggaggccctgcaggacgcagaggaggcccag
cgggagtttgacgaggagctgaaggataaattggaggcggtggaggacgaggtggaggat
aaaggggaggcggtgctgcaggccaggaggagagctgatgagctgcagcaggaggccaaa
gagctgctggcccagagcagcatcaagctgcagagactcggagagctggaggtttcctac
gaggccaaccagcgcatcctggaggccaaagctgcagagctggctgagctggagcgaagc
gcccgccgcatcctggaccagatcagccacaaggtgacgctgtacagcacctgtctgtga
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