Amphiprion ocellaris (clown anemonefish): 111584624
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Entry
111584624 CDS
T06018
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04514
Cell adhesion molecule (CAM) interaction
aoce04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111584624 (lrrc4bb)
04517 IgSF CAM signaling
111584624 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111584624 (lrrc4bb)
Cell adhesion molecules [BR:
aoce04515
]
Immunoglobulin superfamily
NGL family
111584624 (lrrc4bb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
DUF7617
Motif
Other DBs
NCBI-GeneID:
111584624
NCBI-ProteinID:
XP_023149572
Ensembl:
ENSAOCG00000027281
UniProt:
A0AAQ5XSQ2
LinkDB
All DBs
Position
18
Genome browser
AA seq
745 aa
AA seq
DB search
MRVVMVTSPCTPFPLLWLVQLLLWFHNHGPQLTEAAPPCPTPCTCSNQASRVICTRKTLD
QIPDSISENTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGIKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVETVRGEEENSARQYINETFIELPNP
TVQRGLDGRPGITISPSLSSLSSLSPRANRATENAVTVSIMDVTNIPGLDDVMKTTKIII
GCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTMN
SGTVGEGTLRIHHPEIVNLPNIGRTDTLNHYYKTHHFNNNVMGLSIGTDTMGPGGMLNSK
NQQGLDIPISCTSVPISTSNLLSSSGNGTNTNSISMSPPLPMSLPMPTMGLHGSIKGFMG
QNQNPQMEPLLFKGSSKENVQETQI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgtacccctttccccctcctctggttggtccag
cttctgttgtggtttcacaaccatggacctcagctgacagaggcagcacccccctgcccc
acaccctgtacctgctccaatcaggcgagccgtgtcatctgtacaaggaagactttagat
caaatcccagacagtatttcagagaacacaagatacctcaatctacaagagaactcaatt
caggtgatcaagtctgacacatttaagcatctgcgacatttggaaatcctccagctctcc
aagaaccacatccggcagattgaggtgggagcattcaatggtcttcccaacctcaataca
ttggagctttttgacaaccgtctaacagtggtaccatcccaagcctttgagtacctcagc
aagctaagggaactatggctacgaaacaaccccatcgagacgctgccggcatttgccttt
caccgtgttccctccttgcggcgtctcgatcttggggaactcaggaagctggatttcatc
tcagaagcagccttcgaaggtctggtaaacttgcgcttcttgaatcttggcatgtgtggc
ttgaaggacatccctaacctcaccccactagtgcgactagaggagttggagctgtcagga
aaccagctggggatagtccggcctggatccttccagggtttggtgtcgcttcgcaagctg
tggctaatgcactccagagtgtcagtcattgaacgcaatgcttttgatgacctcaaaaac
ttggaggagctcaacctctcccacaattcccttcattccctgccccatgacctcttcacg
cctttgcaccagctggagagggtacatctcaaccacaacccttgggtgtgcaactgtgat
gttctgtggctcagctggtggctaaaagaaacagtccccagcaacaccacatgttgtgct
cgctgccacgcgcctccaggtataaagggaaagtatattggggaactagaccagagccac
tttacctgctatgccccggtgattgttgagccacccactgacctcaatgtcactgaaggc
atggctgctgagctgaaatgtcgtactggaacctcaatgacgtctgtgaactggttcact
cctaatggcactctgatgacccacggatcataccgagttaggatctcagtgctccatgac
ggaacgcttaacttcacaaatgtgaccgtgcaagacactgggcagtatacttgcatggta
accaattctgctggaaacaccactgcaaccgccgtcctcaatgtgtctgcttcagacccc
agcaacagctacagctactttaccactgtcactgtggaaacagtagagacggtaagagga
gaggaggagaactctgcaagacagtatattaatgagaccttcatagagttgcctaatcct
acggttcagagagggttagatggccgacctggcatcactatatcgccttctctctcttct
ctttcttcgctgtccccaagagccaacagagctactgaaaatgcagtgactgtgtctata
atggatgtaactaacattccaggcctggatgatgtaatgaaaacaactaagatcatcatt
ggttgctttgtagccattacttttatggcagctgtaatgttggtggtcttctataaactc
cgtaagcaacaccagctacacaagcaccacggcccagccagagccattgaaattgtcaac
gtagaagatgagatcggagcaggagccggaagtggcatctcaggtggttcaacaatgaat
tctggcactgttggagaaggaaccctaaggatacatcatccagagatagtcaacctgccc
aacattggccgtacagatactctcaaccattactacaagacgcatcatttcaacaacaac
gtgatgggtcttagtattggcaccgacacaatgggaccaggagggatgctcaacagcaag
aatcagcaaggcctggatatccccatctcctgtacctcagtccctatctctacatctaat
ttgctctcttcatcaggcaatggcaccaacaccaactccatttccatgtccccaccactg
ccgatgtcactccccatgcctaccatgggcttacatggatcgatcaagggtttcatgggc
caaaaccagaatccccaaatggagcctcttctctttaaggggagctcaaaggaaaacgtc
caagagactcagatctaa
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