Amphiprion ocellaris (clown anemonefish): 111584674
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Entry
111584674 CDS
T06018
Name
(RefSeq) transcription factor SOX-13-like isoform X1
KO
K09271
transcription factor SOX15/30
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111584674
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111584674
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4959
DUF5539
Motif
Other DBs
NCBI-GeneID:
111584674
NCBI-ProteinID:
XP_023149640
Ensembl:
ENSAOCG00000020566
UniProt:
A0A3Q1BMH5
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Position
14:8881780..8885246
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AA seq
384 aa
AA seq
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MNRPPEKRKPATVKEKKSGPPSREPVQEEPVQEEPEGPAALPDQTGVRPRPRPVDGTERR
TKTRKNKNVASVRPSQPNADIPKNLSAGESLNPDPAQLTQTSPRQGGGGPVISFTIPPTE
EDLKQMESCLQDKKGHIKRPMNAFMVWAHIHRRALFQARPNAALADISAQLGSEWSKLSK
QQRRPYFEVADKLRVKHQEQFPDYMYCPKKKKCKENLDSQQKAGEADGQATLQHQDSSVS
SFVSQDVHLAQSKLPNLRMYQCPVVVPHAVGCCPHSSFGPYHAAGVQMHQSRLLYGYPNA
SIYVGEVASHHYTHLQGNAIVQVDSEAMQPEHYLCHISQEDLSGFVRPSENLEQPDVATS
KVEYNGDDGDEEEEEEAVDVVGLL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaccgcctgagaaaagaaaaccagcgacggttaaagaaaagaaatccggtcct
ccgagcagagaaccggttcaggaagaaccggttcaggaggagccggagggtcccgccgct
ctgcccgatcaaaccggagtccggcctcgacctcgaccagtggacgggactgaacgaagg
accaagactaggaaaaataaaaacgtggcttcggttagaccaagtcaaccaaacgctgat
atacccaaaaacctctcagctggagaatccctgaacccagatccagcccagctcacccaa
acctcacccagacagggaggtggtggtccagtcatcagctttaccatcccgccgacagag
gaggatctgaagcaaatggagtcttgtctccaagacaagaagggacacattaaacgtccg
atgaatgccttcatggtgtgggctcacatccaccgacgtgccctgtttcaagcccgtcct
aatgccgccctggccgacatcagtgctcagctgggcagcgagtggtccaagctcagtaag
caacagcggaggccctactttgaagtggctgacaaactgagagtcaagcatcaggagcag
ttccctgattatatgtattgccccaagaagaagaaatgcaaggaaaatttagattcacag
cagaaagcaggagaggcagatggacaggcaacattacaacaccaggactccagtgtttcc
tcttttgtctcacaagatgtgcatttagctcaatccaagttaccgaacctcaggatgtac
cagtgtcctgttgtggtgccccacgcagtgggctgctgtccccactcatcttttggtcca
taccatgcagcgggcgtccagatgcaccaatcaaggcttctctacggatacccaaatgcc
agcatctatgtgggagaagtggcgagtcaccactacactcacctgcaggggaacgcaatc
gttcaggtcgacagtgaagccatgcagccagagcattatctatgtcacattagtcaagaa
gacctctcgggctttgtcagaccctcggagaaccttgagcagcctgatgttgccaccagt
aaggtggaatataatggggatgatggtgatgaggaggaggaggaggaggctgttgatgtc
gtgggattgctctag
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