Amphiprion ocellaris (clown anemonefish): 111584727
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Entry
111584727 CDS
T06018
Symbol
cdhr1a
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111584727 (cdhr1a)
Cell adhesion molecules [BR:
aoce04515
]
Cadherins
Cadherin related
111584727 (cdhr1a)
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GFIT
Motif
Pfam:
Cadherin
RibLong
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
111584727
NCBI-ProteinID:
XP_023149724
Ensembl:
ENSAOCG00000018471
UniProt:
A0A3Q1DBY3
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Position
16:9904270..9918373
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AA seq
869 aa
AA seq
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MKNVKILHLPLLFLFVHACFAQADFAPYFFDNGPYSHNGNLALFSLSEDTAVGTQIYCLN
GTDPEGQKVRYGLSFDPGSKEYFRVDPESGNITLVEKLDREKQDSIDVLVSITDGQSKVV
ERVTIFVMDANDEKPEFQNMPAIIDVVETTESGSSIYKAQAVDKDTGSGGSVTYFLQNPQ
SSLFAIDRHSGVLRIKSGEMLDYEKTKTHFVTVIAKDGGGTFNGKEQFLSSSATLTINVI
DAQDTPPSFIGTPYFAYVYEVSGPGSEIFSVNAKDGDVGNPNPIRYSFDDGDDGVFSINR
TSGLITLLTLPIHLKREIFNIKVRASEVSPEGRLMDYSLTTVVIRVVDLNNNPPTFYGEN
GQQNMFELTMYEHPPEGEILRGLKITVNDSDQGANAKFNLRLIGPGRMLRVVPQTVLNEA
QVTILVEDSAAMDYEKHHFLTYKLLAVEIDTPERFSATADIVIHLLDTNDNAPKFSSDYY
IARIPENSPGGSNVVSVTAIDPDSGPWGEVKYSIYGSGADLFLIHPESGIIYTQPWASLD
AEVRSKYNFYVKAEDAEGKYSLAEVFVTVLDLNDHPPAFNDNFLEKTMVIGAPVKIEAVD
DDAEVPNNVIEYAIMKAEPDNNIFDIDADTGEIVLKSYIKSMAIIQNITKQRDCTWSLLV
QARDRGQPSFSTTAVVKIDITEATQLKGGPLGSFLLQNRNKPLQILGMLAGVISLMVVVT
VIISTAIFMRNKKSNRILPNRRVRRRPRKQQTWNFKNPFKEPETPGVKFIVEEEEREPEV
VVENANYNNNVSTAVRHWPPPPPPCAPCLPPPPPPYIPGERQWVVPTGSTVVAPKPKKKP
VITRQDTVNKALVSELKMRLEQKRNNSFT
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgtaaagattctacatttgccgcttctttttctgtttgtgcatgcctgcttt
gcacaagcagattttgccccctatttctttgacaatggaccctacagccacaatgggaac
ctggccttgttcagcctctcggaggacacggctgttggtacacagatctactgtctcaat
ggcacagaccctgaaggccagaaggtgagatatggcctgtccttcgatccggggtccaaa
gagtacttcagggtcgaccctgaatctggaaatattacattagtggaaaagctcgaccga
gagaaacaagattctattgatgttctcgtcagcatcacagacgggcaaagcaaggtggtg
gaaagagtcaccatatttgtaatggatgccaatgacgaaaagcctgaattccaaaacatg
cctgcaatcattgatgtagtggaaacaactgaatctggaagcagcatctacaaagcccag
gcagtagataaagacacgggctcaggaggctcagtcacctacttcctccagaatccacag
tccagtttgtttgccattgaccgacacagcggtgtccttcgtatcaagtcaggagaaatg
ctggactatgagaaaacaaagacacactttgtcactgtcattgcaaaggatggtggtgga
acctttaacgggaaggaacaatttctgtcgtcctctgctaccttaacaatcaatgtgatt
gacgcacaagacacgccgccatctttcattgggacgccctacttcgcctacgtttatgaa
gtctcagggccaggatctgaaatatttagtgtcaatgccaaagacggtgacgtgggaaac
ccaaatccaatccgttactcttttgatgatggcgatgatggtgttttcagcatcaacaga
acaagtggtttaatcactctgctgactctccccattcatctgaagagagaaatctttaac
attaaagtcagggcttcagaagtaagtcctgaaggcagactcatggactatagtttgacc
acggtggtgatccgtgtagtggacctaaacaacaacccacctactttctacggagagaac
ggccaacagaacatgtttgagttgaccatgtacgagcatccgccagagggagagatactc
cgagggctgaaaattactgtcaatgactctgatcagggtgcaaacgctaaattcaacctg
agactgattggaccaggaaggatgctgcgagtcgtccctcagactgttctcaatgaggcc
caagtgacaatcttagtagaagactctgctgcaatggactatgagaagcatcattttcta
acatacaagctacttgctgtcgagattgacactccggagaggttcagcgccacagcggac
attgtcattcatctcctagacaccaatgacaacgctcccaaattttcctccgattactac
atcgccagaattccagaaaactcacccggtggctccaatgtggtgtcagtgacggcaata
gacccagactcaggaccttggggtgaagtgaaatattctatctatggatctggggctgac
ttgttcctgatccaccctgaatctgggatcatctacacccagccgtgggcgagtctggat
gcagaggtgaggtccaagtataacttctatgtgaaggcggaggacgcagagggcaagtac
agcctggctgaagtctttgtgactgttttggacctgaacgatcatccaccagctttcaat
gataacttcctggagaagaccatggtgattggagcaccggttaaaatagaggctgtagac
gatgatgcagaagttcccaacaatgtcatcgagtacgccatcatgaaagctgagccggac
aacaacatctttgacatcgacgctgacacgggggaaatcgttctcaagtcctacatcaag
tccatggccatcattcagaacatcaccaagcagagagactgcacctggtcactgctggtt
caggcccgagaccgaggccagccgtccttcagcaccactgcagtcgtcaagatcgacatc
accgaagctacccaactcaagggggggcctttgggatcatttttattgcagaatagaaac
aagcctttgcaaatcctaggcatgctcgctggtgtcattagtctcatggtcgtagtcaca
gtcatcatctccactgcaatattcatgcgcaacaaaaagtccaaccggatcctgcctaac
cgccgcgtacggagaaggcctcggaaacagcaaacctggaacttcaaaaatcctttcaag
gagccggaaactcccggagtgaaattcatagtggaagaggaggagcgggagccagaggtc
gtcgtggagaatgccaactacaacaacaacgtcagcactgctgtgagacactggcccccg
cctccgcctccatgtgcaccttgtctgccccctccaccgcctccctacatcccaggagag
aggcagtgggttgtaccaacaggctcaacagtagtagcacccaaacctaaaaagaagcca
gtgataaccaggcaggacactgtgaacaaagcactggtttcagagctcaagatgaggctg
gagcagaagaggaacaatagttttacctga
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