Amphiprion ocellaris (clown anemonefish): 111584731
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Entry
111584731 CDS
T06018
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
111584731 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
111584731 (lrit1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
fn3
ig
Ig_2
LRR_5
LRR_14
C2-set_2
RNA_pol_Rpb1_2
LRR_EndoS
DUF6161
Motif
Other DBs
NCBI-GeneID:
111584731
NCBI-ProteinID:
XP_023149728
Ensembl:
ENSAOCG00000034088
UniProt:
A0AAQ5Y8K7
LinkDB
All DBs
Position
16:complement(9926881..9931932)
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AA seq
651 aa
AA seq
DB search
MFLVLILGLYVATGELFSPVSSCPSQCSCFYHNLSDGSKARSVICNDPEISLVPVGFPVD
TSKLRIEKTSIQRIPSEAFNYLSSLEFLWMSFNTLSTVNSDSFRGLFNLEELRLDGNALT
AFPWESLMDMPSLRLLDLHNNQLTSLPAEATTYIRNLTYLDLSSNSLLTLPAEVLSTWLA
AKPTQGPESSKMILGLHDNPWVCDCRLYELVQFQKSQTLSVAFIDTRLRCSAPESVSGVL
FSDAELRRCQLPRIHTAVARVRSAVGNNVLLRCGTIGVPIPDLTWRRADGRALNGTVQQE
NSKEGITWSILSVPAVSYRDSGKFICKATNYAGNAEAVISLIVSNSPKPEGNQTTNDKKP
KVKKPNPVGKAAYQEKLVARYVVPTSTPSSLSALDPGLLPGLSLDPGLASYSADDRATPG
PATSSNPDALLDLEKTNLSNLAANTSSLQQDPDRVVRSVKVVGDTDNTISLNWRAPKAKN
TTAFSVLYAVFGERDMRKINVGAGQNRVTIEGLVPRTKYIACVCVRGLIPKKEQCVIFST
DEAASATGTQKLINVIVITVACIIAVPLTVIVCCGALKRRIQKYWGKKTKDIQDSYVTFE
TLSPGTKAKGLEGEYLNRLNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgtcctgatcctggggctctacgtggccacaggtgaacttttctccccagtg
agttcctgcccttcgcagtgcagctgtttttaccacaacctgagcgatggatcaaaggcc
aggagcgtcatttgcaacgatcccgagatatctcttgtgcctgtcgggttccctgttgac
acgtccaagctacggattgagaagacatccatccagcggataccaagcgaagccttcaac
tacctctccagtctggaattcctgtggatgtctttcaacacgctgtccaccgtgaactcg
gacagtttccggggactgttcaacctggaagagcttcgtctggacgggaacgccctcacc
gcctttccctgggaatctctcatggatatgcccagcctcagacttctcgatttgcacaac
aaccagctcacctcgctgcccgccgaagccaccacgtacatcaggaacctcacctacctg
gatctgtccagcaacagcctgctgaccctgccggcagaggtgctgtccacctggctggct
gcaaaaccaacgcaagggccggagagctccaagatgatacttggtctccatgacaacccc
tgggtgtgcgactgtcggctctatgagctggtccagttccagaagtctcagactctctca
gtggcgttcatcgacacaaggctccggtgttcggctccggagagtgtgtcgggggtcttg
ttcagtgatgcagagttgcgtcgctgtcagctcccgcgcatccacacagcggtggcacga
gtccgaagcgctgtggggaacaatgtgctgctccgctgtgggaccattggagtccctatc
ccagacttgacttggcgcagggccgatggacgagctctgaacggaacagtccagcaggag
aactcaaaggagggaatcacctggtccatcctcagtgttccagctgtgtcttaccgtgat
tcagggaaattcatctgcaaggctactaactatgcaggaaacgcagaggctgtcatttct
ctcattgtctccaactcaccgaaaccagaggggaaccaaaccaccaatgacaagaagccc
aaagtaaagaaaccaaacccagtgggcaaagctgcctaccaggagaaactggttgccaga
tatgtggttccaacctccactccttcatccctgtctgccctggatcccggccttctgcct
ggtctcagtcttgatcctggactggccagttacagtgcggatgacagagccaccccagga
cccgccacctcctccaacccagacgcgcttctggatctggagaagacaaatctaagcaac
ttggcggccaacacctcatcactgcagcaggacccggacagggtggtccgctcagtgaag
gtggtgggggacacagacaatacaatttctctgaactggagagcccctaaagccaaaaac
acaacagcgtttagtgtgctgtatgcggtgtttggggagagggacatgagaaagatcaat
gtcggggcgggtcagaaccgtgtaaccatcgaagggttagtgcccaggaccaagtacatt
gcctgtgtgtgtgtgagggggctgatccccaagaaagagcagtgtgtcatattttccacc
gatgaagcagcgagtgctactggcactcagaagctgattaatgtgattgtgatcacagtg
gcctgtatcattgcggtcccgctgacagtcatcgtctgctgtggggcgctgaagagacgc
attcagaagtactgggggaaaaaaacaaaggacatccaagattcctatgtgacctttgaa
acactgtcgcctggcacaaaggccaaagggctcgagggcgagtatttgaacagactgaac
cctgaggagtccaacaggctgctgtcagctcgctccagcctggactccgaggccacagct
aagatagagggacagcctaacgagtacttctgctga
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