Amphiprion ocellaris (clown anemonefish): 111584735
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Entry
111584735 CDS
T06018
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X4
KO
K16474
intraflagellar transport protein 88
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aoce03037
]
111584735 (ift88)
Cilium and associated proteins [BR:
aoce03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
111584735 (ift88)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_6
TPR_14
TPR_7
TPR_16
CFAP70_TPR_C
TPR_11
ANAPC3
TPR_9
RMD1-3
TPR_17
DUF6340
ARM_TT21_5th
SNAP
TPR_10
TPR_CcmH_CycH
TPR_SusR
ARM_TT21_4th
CNOT10_TPR
TPR-S
TPR_YpiA_C
DUF2225
ARM_TT21
ARM_TT21_C
CFAP70_mid_TPR
HAT_PRP39_C
ARM_TT21_2nd
TTC22_N
Consortin_N
TPR_Psidin_N
SUCH1_C
RNPP_C
SHPRH_helical-1st
RPN7
MYCBP_helical
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
111584735
NCBI-ProteinID:
XP_023149731
Ensembl:
ENSAOCG00000018253
LinkDB
All DBs
Position
11:complement(28146330..28173402)
Genome browser
AA seq
824 aa
AA seq
DB search
MENVHLAVEEDDLYSGYNDYNPTFDSEELENDVGFQQAVRTSHGRRPPMTAKFPGTAMGA
RPLASSFGSRMPLASSMGRPMTGAVQDGAARPMTAVRAAGYTSSLTRGSTFDPLGQSKGP
APPLEAKNEDTPEEKIKILEKKVNDLIEESCMAQSIGALQLALEKAKEAGRKERALVRQR
EQSGNADHINLDLTYSVLLNLANQYANNEMYPEALNSYQVIVKNKMFSNAGRLKVNMANI
YFKQKNYPKAIKFYRMALDQISNTHKEMRIKIMQNIGVVFVRMGQYSDAITSFEHIMSES
PNIRTGFNLILCYYAIGDRERMKKAFQKLISVPLGIDDEDKYIPTNDDTNSNMVIEAIKN
DKLHQMERDLKVLAEKYIMTAAKLIAPAIETSFATGFDWCVDMVKSSQYVELANDLEINK
AITYLRQKDFNQAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAMNADR
YNPAALINKGNTVFVKQDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLNRLEEALDCF
LKLHAILRNSAQVMYQLAHLYELLEDPQQAIEWLMQVISVTPTDPQALAKLGELHDGEGD
KSQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLMVA
SCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEVQDYATKLKKVEKMKE
IREQRVKSGREGSARGRREGREGSAGSADSGHSSSSTKGERLSAKMRSLPGSNEPYETSS
PKELDASYVDPLGPQMERPKTGAKRRVEDDDFADEELGDDLLPE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtgcatttggctgtagaggaggatgatctttactcgggttataacgactat
aatccgacatttgactccgaggagttggagaatgacgtgggcttccagcaagcagtaaga
acaagtcatggacgaagacctccgatgactgccaaatttcctggcactgccatgggagct
cggcccttagcttcttcctttggatcccggatgcctttagcctcttcgatgggcagaccc
atgacaggagctgtgcaggatggggcagcccgaccaatgactgctgtcagagcagcaggt
tacacttcttccctgacccgtggctcgacctttgaccctctgggccagtccaaaggtcca
gcacctccacttgaagcaaagaatgaggacacgcctgaggagaagatcaagatcctggag
aagaaagtgaatgacctgatagaagagagctgcatggcgcagagcataggggccttacaa
ctggctcttgaaaaagccaaagaggcaggaaggaaggagcgagcgctggtcagacagagg
gagcagtcgggcaatgcagaccacatcaacttagacctcacctactctgtcttgctcaac
cttgccaaccagtatgcaaacaatgaaatgtacccagaggccctgaacagctaccaggtc
attgtgaagaacaagatgttcagtaatgcaggtcgtctgaaagtcaacatggccaacatc
tacttcaaacagaagaactaccccaaagccatcaagttctaccgaatggccctggatcag
atctccaacactcacaaggaaatgaggatcaagatcatgcagaatattggcgtggtcttt
gtgcgcatgggccagtactctgacgccataacatcttttgagcacatcatgagcgagagt
cccaacatcaggacgggcttcaacctcatcctgtgctactacgctatcggcgacagagag
aggatgaagaaggcctttcagaagctcatctctgttcctctggggattgatgatgaagac
aagtacatcccaacaaatgatgacaccaactcaaatatggtcattgaggccattaaaaac
gacaagctacaccagatggagagagatctaaaagtcctggcagagaagtacatcatgact
gcagccaagctcatcgctccggcaatcgagacttctttcgctactggatttgactggtgt
gtggacatggtgaagagctcccagtatgttgagcttgccaacgatctagaaatcaacaaa
gccatcacctatctccgacagaaggacttcaaccaggcagtggaaacactgaagacattt
gagaagaaggacagcagagtgaagagcgctgcagccactaatctctctttcctctacttt
ctggagaaggactatgaccaggctgacagatatgccgatctcgccatgaacgccgatcgc
tacaaccccgcagcgcttatcaacaagggcaacacagtgtttgtcaaacaggactatgaa
aaggctgcagagttctacaaagaagcactgaggaatgattcctcatgcaccgaagccctc
tacaacctgggtctgacctataagaggctgaatcgcctggaggaggctctggactgtttc
ctgaagcttcatgccattctgaggaacagcgcccaggtcatgtaccagctggcccacctt
tatgagctcctggaggatccccagcaggctatcgagtggctgatgcaggtcatcagtgtg
actcccactgacccccaggctctggccaaactgggagagctgcacgatggtgaaggagac
aaatcccaggctttccagtactactatgagtccttcaggtatttcccctccaacatcgat
gtgattgagtggctcggggcttattacatcgagacacagttctgtgaaaaggccatccag
tactttgaaagagccacactcatacaacccacccaggtgaagtggcagctaatggtagca
agctgttacagaagaagtggaaactaccaaaaagctctggaaacttacaaagacatccac
cgcaagtttccagaaaacgtggaatgcctgcgtttcctggtgaggctgtgcacagacatg
ggattgaaggaagtccaagattacgccaccaagctgaagaaggtggaaaagatgaaggag
atcagagaacagagggtgaagtctggacgggaaggcagcgccagaggtcggagagaaggc
agagagggcagcgcagggagcgctgacagtggccacagcagcagcagcactaaaggagaa
cgtctgagcgccaagatgagatctcttcctggttctaacgagccctacgagaccagcagc
cccaaagaactcgatgcttcctacgtggatccacttgggcctcagatggagagaccaaag
acaggagccaagaggcgagttgaggatgacgactttgccgacgaagagctgggagacgac
ctgctgccggagtag
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