Amphiprion ocellaris (clown anemonefish): 111584859
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Entry
111584859 CDS
T06018
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111584859 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111584859 (thoc5)
03041 Spliceosome [BR:
aoce03041
]
111584859 (thoc5)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111584859 (thoc5)
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111584859 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
111584859
NCBI-ProteinID:
XP_023149945
Ensembl:
ENSAOCG00000014340
LinkDB
All DBs
Position
6:complement(24032146..24039852)
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AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVLRSDGGTPEMKRGRGEGDTQDVRVYSEEVELDGRSPDQDFLQYKESC
ESLATLMSEIQELKASGAKEGCVEVEQKRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHEA
KQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEGEFYQEAPQEISRPHLT
KSDPHQLTLARLDWELEQRKRLAEKYKESQASKETIQKSIEVKKEHLRSLQPGLNAIMQA
SLPVQEYLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYGQACDKNLSVSISGDVDEAKA
LSKPPDDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGS
ILHLFFYYLMNLNILTVKTKVSTATDLNTAISAGELLKSDTLLSCLYTSDQGRETPNPAN
RYQFDKVGIISFADYLEDLGHPYMWVQNLGGLHFPSDASETVCVGSSLSASHMESTMKLL
RGRVQSRLALHKQFASLEHSIIPVSSECQHLFPAKIISRLARWTTISQQEYMDLHYTRHV
SDAGLAKETDLYFMSVVERGTARLQAAVVLSPRYPEISPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQIARLCVCLDVYLETEGQDDGVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagacgctctgaagaagcgaaagtcgaaggttctccgcagtgacggaggaacc
ccagagatgaagcgaggccgcggagagggagatacgcaggatgtgcgtgtatatagtgag
gaggtggagctggacggcaggagccctgaccaggacttcttacagtataaagaatcatgt
gagagtctggccacactcatgagtgagatccaggaacttaaagccagtggagccaaggaa
gggtgtgtggaggtcgagcagaaacgtatgcagagctgcattcacttcatgaatctgaaa
aaacttaatcgtctggctcatatgcgactaaagagaggcagagaccagacacatgaggca
aaacagagagttgatgtgcttcaccttcagctgcaaaacctgctttacgaagtgatgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaagcatgaggaaatagacttg
gtcagtgagggagagttttaccaggaggctccacaggagatttccaggcctcatcttaca
aaaagcgatcctcaccaacttacactggcccgactggactgggagctcgaacagaggaag
aggttggcagagaaatataaggagtcccaggcatcaaaggagacaattcagaagagtatt
gaagtgaagaaagagcatctgagaagcttgcaaccaggactcaatgccattatgcaggcc
tctctcccagtgcaggagtacctctccatgccatttgaacagactcagaaacagacagag
attgcccgccacctgcctccacctctctatgtcttgtttgttcaagcaaatgcctatggc
caagcctgtgacaagaacttgagtgtctcaatcagcggtgatgtggatgaggccaaagcc
ctgtccaaacctccagatgactcccaggatgatgaaagtgattcagacgcagaggaggag
caagagaaaacgaagagacgaagaccaactacgggtggccagctggatgataaaagacgg
gagatgctgaaaaggcaccctctgtccctttgcttagacctgaagtgcaaagacggcagc
atcctccatctcttcttctactacctgatgaatctcaacattttgaccgtaaagaccaaa
gtctctaccgccacagatctcaacaccgccatcagcgcaggggagctgctgaagtcagac
actctcctcagctgtctctacaccagcgaccagggacgagaaacacccaatccagctaat
cgctaccagtttgacaaagtcgggattatttcctttgcggattatctggaggacctaggc
cacccgtatatgtgggttcagaatctgggaggactgcattttccaagtgatgcttcagag
actgtgtgtgttggcagttctctgagtgccagccacatggagagcaccatgaagctgctg
aggggacgagtccagtcccgcttagctttgcacaaacagtttgcctctttagaacacagc
atcatcccagtctccagtgagtgtcagcacctgtttcctgccaagataatctcccgttta
gcacgctggaccaccatcagtcagcaggagtacatggatctgcattatacacgccatgtg
agtgatgctggattggcaaaggagactgatctgtactttatgtcagtggtcgaaagaggc
acagctcgccttcaggctgcagtggtgctgagtcctcgttacccagagatctcccctctc
ttctccctctctctgagctggaagggagagcgcagtggacgcactgatgacaacctcaga
gccatggagagtgaggtcaatgtgttcaaaaatgaactacagggaccacgtccaggacac
cagctcctgaccaaccaaattgcacgcctgtgtgtctgcctggatgtatatttggagact
gaaggacaagatgacggtgtggaaggaccacgagagttcccccgtgaaaagatgtgcttg
cgcactgtcaggggcccaaatcgcctgaagccattcaagtacaaccatcctcagggcttc
ttcagtcatcgttaa
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