Amphiprion ocellaris (clown anemonefish): 111584939
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Entry
111584939 CDS
T06018
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111584939 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111584939 (prpf3)
Spliceosome [BR:
aoce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111584939 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
111584939
NCBI-ProteinID:
XP_023150067
Ensembl:
ENSAOCG00000011449
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Position
9:complement(398346..417477)
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AA seq
698 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDDSAG
GFVERLFEALEESRIARGNKGGGEKNRKRDLKDVFGDEPEPGVMWEPPESVGGTTAKRKR
VPRFEEVEEPEVIPGPPAESPGMLTKMQIKQMMEAATRQIEERKKQLSFASSVPGATSQI
DSPPVSRLLGSSSGASSIAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGILGVLGN
SGPHNLVALANLHAMGIAPPKVEIKEVNKPTPLILDEKGRTVDASGKEVELTHRMPTLKA
NIRAVKREQFRQQLKEKPGDDLESTSYFDHRVSITPAQRARRGFKFHDQGRFEKIAQRIR
TKAQLERLQNEIAQAAKKTGIQASTKLALIAPKKEIGEGEVPNIEWWDSYILPSNVDINP
DTKFEEFDLFGVTNLVEHPAQISPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQKEVQE
KVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTA
EQRKEKKVKKLKEDLTDGVYIAVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHKDVNLV
VVEGGPKSQKKFKRLMMHRIKWEEHNSKRDDPDGDDDTKRNNRCWLIWEGTAKERSFGEM
KFKQCPTESMAREHFKKHATEHYWDLALSQSVLEPTDD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccaaagcgggaggtggaggagttgaggccgtgggtagagcgaacggtgaag
aaggttctgggtttctctgaacccaccgtggtcactgcagctctgcactgtgtggggaag
ggcctggacaaaaggaagaccacagaccagctgcgtccattcctcgatgactctgctgga
ggtttcgtcgagcgtctcttcgaagcgctggaggagagtcgcatcgctcgtggaaacaaa
ggaggaggagagaagaaccgcaagagagacctgaaggacgtgttcggagacgagccggaa
ccaggcgtcatgtgggaacctcccgagtcggttggagggacgacagcgaagaggaaacga
gttcctcgctttgaggaggtggaggagccggaggtgattcctggacctccagctgagagc
cccggcatgctgaccaagatgcagatcaaacagatgatggaagccgccaccaggcagata
gaagagaggaagaagcagctgagctttgcctcctccgtccctggagccacatctcagatt
gactcccctccagtctcgcggctccttggcagctcctctggtgcctcctccatcgctcct
tctcaggcggccagcttcatgaacgatgccatagaaaaagcccggaaggcggcggagctg
caggcccggatccagtcccagctggccatgaagcccggcatactgggagtactgggaaac
agcgggcctcacaacctggtggctctggctaacctccacgccatgggcatcgccccgcca
aaagtagaaattaaggaggtgaacaagccgacgcctctgattctggacgagaagggccga
acagtggatgccagcgggaaggaggtggagctcacacaccggatgcccacactgaaagcc
aacatccgagcggtgaaacgggaacagttccgccagcagctgaaggagaaacccggagac
gacctggagtccacgtcttactttgaccatcgggtttccatcacgccggctcagcgcgcc
cgacggggcttcaagttccacgaccagggccgcttcgagaagatcgctcagaggatcagg
actaaggctcagctggaacggctgcagaatgaaattgctcaggcggccaagaagacggga
atccaggcgtcgaccaaactggctctgatcgccccgaagaaagagatcggagaaggagag
gtgcccaacatcgagtggtgggactcgtacatcctgccctccaacgtagacataaacccc
gacactaaatttgaagagttcgatctgtttggtgtgaccaacctggtggaacatccggct
cagatcagtcctccagtggacacagataaaccggtaacgctgggtgtctatctgaccaag
aaagaacagaagaaactcagaagacaaacacgaagggagggtcagaaagaagttcaggag
aaagtccgtctgggtctgatgcctcccccagaacctaaagtgcgaatctccaacctgatg
agagttttggggacggaggcggttcaggatcccaccaaagtggaagctcacgtcagagcg
cagatggccaagaggcagaaggctcatgaggaggcgaatgcagctcggaagctgacggca
gagcagaggaaagagaagaaagtgaagaagttaaaagaagacctgacggacggtgtttac
attgcggtgtacaggatccggaacctgcagaaccctgctaagaagtttaaggtggaggcc
aacgccaaccagctgtacctgacaggaaccgtggttctgcacaaagatgtcaacctggtg
gtggtggaaggaggcccaaaatcccagaaaaagttcaagaggctgatgatgcacagaatc
aaatgggaggaacacaacagcaaacgagacgatccagacggcgacgacgacaccaagagg
aacaacaggtgctggttgatctgggagggaacggctaaagagcgaagcttcggggagatg
aagttcaagcagtgtcctacggagagcatggcccgggaacacttcaagaagcacgcaaca
gaacattactgggacctggcgctgagtcagagcgtcctggagccaacggacgactga
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