Amphiprion ocellaris (clown anemonefish): 111584948
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Entry
111584948 CDS
T06018
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a isoform X1
KO
K05636
laminin, beta 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04510
Focal adhesion
aoce04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111584948 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111584948 (lamb1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
111584948
NCBI-ProteinID:
XP_023150078
Ensembl:
ENSAOCG00000011172
UniProt:
A0A3Q1B3S1
LinkDB
All DBs
Position
3:41136590..41187672
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AA seq
1798 aa
AA seq
DB search
MLQLRLCLLLALQVFTCAQEGGPTVGGASVGDVMFPELSDMCTEGSCYPATGDLLIGRAH
QLSSTSTCGLNRQEPFCIVSHLQDEKKCFVCDSMAPYDERANPTSSHRIENVVTTFAPNR
LKTWWQSENGLENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFA
YDCETSFSSISQGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNM
LKITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYSIYDMVVRGNCFCYGHASECAPIQGAS
PAQEGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFD
MAVFVASGNASGGVCENCQHNTAGHNCEQCQPFYYQHPERDIRDPNICQSCNCDPLGSLN
GGICDQTTDVRTGLIAGQCRCKVNVEGERCERCRQAHYGLSDQPKGCKACTCSPLGTVPG
GNPCDSETGVCFCKRLVTGRDCDQCMSEHWGLSNDMDGCRSCDCDLGGAKNNQCDQVSGQ
CVCRDHMFGRRCDQVESGFYFIALDHYTYEAEDAKFGPGVTVVPRPHPQDRSPTWTGIGL
VNVPEGAFLEFSVNNIPHSMEYDILIRYEPQLPDQWEEVLMVVMRPGPIKADSRCINTVP
DDDNQMISLQPGSRYVVLPRPVCFESGLNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPH
CKNLDIFTTSEEGDSSGNSGWETFQRYRCLENSQSVVKTQMTDICRNFIFSISAMLHQGA
KECQCDPQGSLSTVCDPSGGQCQCRPNVVGRSCDRCAPATFQFGPNGCRACACNTQGSHD
QFCDQLTGQCVCISGAFGRQCDRCLPGHWGFPSCRRCSCNGHADTCDPDTGHCIDCREHS
TGHSCERCVDGYYGDPVLGSGDHCRPCMCPDGPDSRRQFAESCYRGDESQQAVCICSAGY
RGARCDECSPGYYGNPGEEGGRCQPCQCNNNIDVLDPMSCDGRTGECLRCLYHSEGAACQ
SCKLGYYGDALQQDCRKCVCNQLGSDPSSCPTAADCNCDRSSGQCRCLPNVIGQHCDRCA
PDTWNMASGRGCQSCSCDPKHSYGTSCNEISGQCSCQPGFGGRTCSECRELFWGDPEVKC
HACDCDPRGISEQQCNKVGGQCVCVDGVSGPRCDVCARGFAGTFPDCRRCHQCFAEWDDV
VGQLTNQTHRLVNKVNAVKASGVSGPYKKSMDSMERSIADIQVILDQNPAAQPLTEIQHL
LQQASDLMGALSHTLNHTERMVVQLKEQDAAAETKLDSVTSDAQKLERTVQELLDQVEFI
KNSDIRGATDSITKYFLQSQVAEARANASTIDSGSPVETSAALRQLTQDKLNQTREEFLR
RHTEHAQKLDDLAGDLQTLDLSEISQKTCGSPSSGQDLCLSCGGLGCVEADGRIKCSRDG
CNGVVTTANAVWKKAQTSEQEIISAMEEVEKLSKMVLEAKLQADEAKLSAQDVLMKTNKT
KQKVDQSNEELRSLIRQIRDFLTQDAADLESIELVATEVLAMQMPTTPGLLQNLTDEIRQ
RVGELGHVETILQQSADDIRRAENLLDQARQASEEAADVKDSAERVKQALKEAQRAQSAA
SSAIQQASADIQNANVLLSSVESETADAELMLNNATKRLQRLEQDVTLLRGKALNINLST
EQTNQDAASIGKIAEEVKKALDSELKEKYATVEQLIGQKAGGVADAKKRAESLQQEAKEL
LLQASGKLQLLKDLEKSYEDNQRTLDVKAEQLVELEAAVKELLQEISHKVTVYSTCLF
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcttcggttgtgtctgctgctcgctttgcaggtgtttacctgtgctcaggag
ggcgggccaacagtgggcggggcctccgtgggtgacgtcatgtttccggaactcagcgac
atgtgcactgaaggcagctgctacccggcaacaggagaccttctgattggtcgagcccac
cagctgtcctccacctccacctgcggattgaaccgacaagaaccattctgcatcgtcagc
cacctgcaggatgaaaagaaatgctttgtgtgcgattcgatggcgccgtacgacgagcgg
gccaatccaacgagcagccatcgcatcgagaacgttgtcacaacattcgccccaaacaga
ctgaagacctggtggcagtctgagaacggtctggagaacgtcaccatccagctgaaccta
gaagctgagttccacttcacacacctcatcatgaccttcaagacgttccgacctgctgcc
atggtgattgagcgatcagctgacttcgggaagacatggcaggtttaccggtacttcgcc
tatgactgcgagacgtcattttcctctatttcccagggtccaatgcagaaggttgatgat
gtcatctgtgactcacgctactctgacatcgagccgtccaccgaaggagaggtgattttc
agagttttggatccagcgttcaggatcgatgacccgtacagcccccgaatacagaacatg
ttgaagatcaccaacctgcgggtgaagttcaccaaactgcacacgctgggagacaacctg
ctggactcccgtatggagatcaaagagaagtattactactccatctacgacatggtggtc
cgaggaaactgcttctgctacggacacgcctctgagtgtgcccccatccagggggccagc
cccgcccaggaaggcatggttcacggccactgcatgtgtaaccacaacactaaaggtctg
aactgtgaacagtgtcaggacttctaccacgaccttccctggagaccagctgagggacgc
aataccaacgcctgcaagaagtgtaactgtaaccagcactcggactcgtgtcacttcgac
atggccgtgttcgtggcttcaggaaatgccagcggaggcgtttgtgaaaactgtcagcac
aacacagctggacacaactgtgagcagtgccaaccgttttactaccagcatccggagaga
gacatccgagaccccaacatctgccagtcttgtaactgcgaccccctgggctctctgaac
ggaggaatctgtgaccaaaccacagatgtccgaacgggtctgatcgccggtcagtgtcgc
tgcaaagtcaacgtggagggagaacgttgtgagcgctgcagacaggcgcattatggactg
agtgaccaaccgaaaggttgcaaagcgtgtacctgcagtcctctgggaacagttcctgga
ggaaacccctgtgacagtgaaactggagtttgtttctgtaaacgtctggtgactggacga
gactgcgaccagtgtatgtctgaacattggggtctcagtaatgacatggacggctgcaga
tcatgtgactgtgacctgggaggagccaaaaacaaccagtgtgatcaggtgagtggtcag
tgtgtctgcagagatcacatgtttggtcggcgctgtgatcaggtggagtctggattttac
ttcatcgctctggatcactacacctacgaggctgaggatgccaagtttgggcctggagtg
acggtggtcccgaggccccaccctcaggaccgtagtcccacctggacaggtatcggtctg
gtcaatgttccagagggggctttcctggagttctctgtcaacaacattcctcactccatg
gaatacgacatcctcatccgctacgagcctcagctgcctgaccaatgggaggaggttctg
atggtggtgatgaggcctggaccaatcaaagctgacagcagatgcatcaacacggtgcct
gatgatgacaaccagatgatctcgcttcaaccgggctcacgatacgtggttcttcctcga
ccggtttgttttgagtctggtctgaactacacggtccgcctcagtttgccgctgtactcg
gccctcagcgacgtccagtctccgtacacgctcatcgactcgatcgtgctgatgcctcac
tgtaagaacctggacatcttcaccacctcagaggaaggggactccagtggaaacagcggc
tgggaaacttttcagcgttatcgatgtctggagaacagccagagtgttgtcaagacgcag
atgacagacatttgcagaaacttcatcttcagcatctctgccatgttgcaccagggtgct
aaagaatgccagtgcgaccctcagggctccctcagcaccgtgtgcgaccccagcggtggt
cagtgccagtgccgccccaatgtggtcggcaggagctgcgacagatgtgctccggccacg
ttccagttcggacccaacggctgccgagcatgtgcgtgcaacacccagggttcacacgac
cagttctgtgatcagctgaccggtcagtgcgtttgcatttctggggcgttcgggcggcaa
tgcgaccgctgcctgccaggacactggggcttcccctcctgcagacgctgctcctgcaac
ggacacgccgacacctgcgaccccgacaccggacactgcatcgactgcagggagcacagc
accggacacagctgtgagaggtgtgtggacggttactatggcgacccggtgctggggtca
ggtgaccactgtcgtccttgtatgtgtcctgatggccctgacagccggcgacagtttgca
gaaagctgttaccgtggagatgagtcgcagcaggctgtctgtatctgcagtgctggatac
cgaggtgctcgctgtgacgagtgctcacctggttactatggaaaccccggtgaggagggg
gggcggtgccagccctgtcagtgcaacaacaacatcgatgtgctggaccccatgtcctgc
gacggccggaccggagagtgtctgcgctgcctgtaccacagcgagggagctgcctgccag
agctgcaagctgggttactacggtgacgccctgcagcaggactgcaggaagtgtgtttgt
aaccagctgggcagtgatccgtccagctgtccgactgctgctgactgtaactgcgaccgg
agcagcggtcagtgtcgctgcctgcccaacgtgattggtcagcactgcgaccgctgcgcc
cccgacacctggaacatggcgagcggccgtggctgtcagagctgcagctgtgaccccaag
cactcgtacgggacgtcctgtaacgagatcagcggtcagtgttcctgccagcccggcttc
gggggaaggacatgcagcgagtgtagagagctgttctggggagaccctgaagtcaaatgt
catgcctgcgactgcgaccctcgtgggatctcagagcagcagtgcaacaaagttggcggc
cagtgtgtctgtgtggacggcgtatccggacctcgctgcgatgtctgcgcacgtggattc
gcaggaaccttccccgactgccgccgctgccaccagtgcttcgccgagtgggatgatgtc
gtcggtcaactgaccaatcagacgcaccgactggttaacaaggtcaatgctgtcaaagcc
agcggagtcagcggaccttacaagaagtccatggacagcatggagaggagcatcgctgac
atccaggtcatcctggaccagaacccagctgcacaaccgctgactgagatccagcacctg
ctgcaacaagccagtgacctgatgggggccctgagccacacattgaaccacactgagcgg
atggtggtgcagctgaaggagcaggacgctgctgcagaaactaaactggactctgtgacg
tcagatgctcagaagctagagagaacagttcaggagctgctggatcaggtggagttcatc
aagaactctgacatcagaggggcgacggacagcataactaagtacttcctgcagtctcag
gtggctgaagctcgagccaacgcctcaaccatcgacagcggcagcccggtggaaacctct
gctgctctacggcagctcacacaggacaaactgaaccagaccagagaggagttcctgagg
agacacactgagcatgctcagaaactggatgacctggcaggagaccttcaaactctggac
ctatcagagatcagccagaagacctgcggcagcccttcgtcaggtcaggacctatgcctg
tcctgtggaggtctgggctgcgtggaagctgatggtcgcattaagtgcagcagagacgga
tgtaacggtgtggtgacaacggccaacgctgtctggaagaaggcccaaacgtctgagcaa
gaaatcatcagcgccatggaggaagtggagaagctctctaagatggtgttggaggcaaag
ctgcaggctgatgaggcgaagctgagcgctcaggatgtcttgatgaagaccaacaaaacc
aaacaaaaagtggaccagagcaacgaggagctgcgaagcctcatcagacagatcagagac
ttcctcacacaggatgctgcagacctggagagcattgagctggtggctactgaggttctg
gccatgcagatgccaaccacaccaggtctgctgcagaaccttaccgatgagatccggcag
agggtgggagaactgggacatgtagaaaccatcttgcagcaaagtgctgatgacattcgg
agagcagagaacttgctggaccaggcccgccaagctagtgaggaggcggctgacgtgaag
gactctgcagagagagtaaagcaagctctgaaagaagctcagagagctcagtcggccgcc
agcagcgccatccagcaggcctctgctgacatccagaacgccaacgtcctgctgtcctca
gtggagtcggagacggcagacgcagaactcatgctgaataatgcaaccaagaggctgcag
aggctcgagcaggacgtgacactgctgagaggcaaagctctgaacatcaatctgagcact
gaacagaccaatcaggatgcagcgagcatcggaaaaattgcagaggaggtcaagaaggcc
ctggactcggagttgaaggagaagtacgccacagtggagcagctgattggtcagaaggca
gggggcgtggccgacgctaaaaagagggcggagtcactgcagcaggaagccaaagagctg
ctgctgcaggctagcggcaagctgcagctactgaaagatctggagaagtcgtatgaagac
aaccagagaacactggatgtgaaagcagagcagctggtggagctggaggctgctgtgaag
gagctgctgcaggagatcagccacaaggtcaccgtgtacagcacctgtttgttctag
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