Amphiprion ocellaris (clown anemonefish): 111585198
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Entry
111585198 CDS
T06018
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X8
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111585198 (gapvd1)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111585198 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
111585198
NCBI-ProteinID:
XP_023150711
Ensembl:
ENSAOCG00000020008
LinkDB
All DBs
Position
6:complement(18052102..18081792)
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AA seq
1447 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVGSEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFIDGYKTLGFQETIYGEFLARLRENPRLVASCLVAGERL
NQEHTPGVIHTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
GYKQRVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDADPR
RKSSLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTVVYITHNQLLALVDFVR
SVMAGDHLREEEHMALETLLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIA
ARSRSRTNIAQEGEAEASSQESLQELMPEEVLVISLGTGPQTVPGMMSENEVLNLQMADG
AQGDGHADDTKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGP
SGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSD
FDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPYGSTISETTSEAWSVEVLPSDS
EAPDLKQEERLQELESCSGVGSTSDDTEVREVSSRPSTPGLSVVSGISATSEDIPNKIED
LRSECSSDFGGKDSVTSPDGEESGHGAHHLTSPPSQADSLLAMFDPLSSGEGSSTGTIVR
PKVHYARPPHPPPDPPIPEASALGQETRHSLFTPHCLAQAELEHTKQRHSFPDRLVRSRS
SDIVCPGRRPTSDPGLNRRVAVEERDPAGAFALGPSSSPSKDSLKGEVEDRKDSDDEKSD
RNRPWWKKRFVSAIPKAPIAAFRKRDKQEKDEIAQERVPQDDPLPRQSSQTQAAEDILDK
YRNIKRTSPSDGATAGASYDGTGDLCVEDSVHDSPREDTLQNISTDDLPDSASQTAQQHD
SKFSFSDAKKKLRLALCSADSVALPIMAPAATRNGLPDHMDPEDNEIVCFLKVQLAEAIN
LQDKNQMAQIQETTRCVSRFDPRTCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQAHL
ERLLQRVLRDKEVANRYFTTVCVRLLLEHMESKMLDFIKAFQVCTAADDKTAAVEDFLRY
LYGAMARDAIWQYASEDQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQLFHEHIQRL
SKVVTANHKALQIPEVYLKEAPWPSAQSEIRTINAYKTPRDKVQCILRMCSTIMNLLSLA
NEDSVPGADDFVPVLVFVLIRANPPCLLSTVQYINNFYASRLSGEECYWWMQFTAAVEFI
KTIDDRK
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtacgtg
gggtcagagaagcagctgatccagaggctcaacagtgatgtgctgaagacagctgagagg
ctgtaccgggctgcctggattgccaagcagcagaggatcaaccttgatcgtcttattctc
accagtgcggaggcctctccggctgaatgctgccaacatgccaaaatgctggaggataca
cagttcattgatggctacaagactctgggtttccaggagaccatctatggcgagttcttg
gccaggctgagggagaatcccagactggttgcatcctgtctggtggcaggagagaggctg
aaccaggagcacaccccgggcgtcatccatacggtcttcacctcactgtacggcaactgt
atcatgcaggaggatgagagctacctgttacaggtattgcgatacctggtggagtttgag
ctgaaggagagtgacaaccctcgccggctgctccgacggggaacctgcgccttcagcatc
cttttcaagctcttctctgagggcctgtactcagccaaactcttcctcactgccaccctt
catgaacccattatgcagctgctggtggaagatgaggaccacctggagactgaccctgcc
aaggtgacagagcgcctcactcccgctcagcaggaacgctttggagagaaaggctctgag
ggctacaagcaaagggttcaggcagctgttgaggccaatgaggccaagttggtagctctg
gtcaacaagtttatcggttacttaaagcagaacacctactgctttcctcacagcctgcgc
tggattgtgtctcagatgtacaagactttgtcatgcgtggagcgtcttgaggtgggtgag
gtgcgcaccatgtgtacagacctactgctgacctgcttcatttgcccagctatagtcaac
ccagagcagtatggtattatctcagacgcacccatcaatgaagtggcccgcttcaatctg
atgcaggttggacaacttttgcagcagttggccatggctgatgatgatgcagacccaagg
cggaaaagcagtttgtctaagtttgacaagagctgtgttgctgcatttctggatgtggtg
attggaggacgagcagtcgaaaccccacctatgtcttcaatgaaccttctagaaggcctc
agtaggactgtggtctatattacgcataatcaactccttgcattggtggactttgttcgg
agtgtgatggcaggggaccaccttcgagaggaggagcacatggccctggagaccctgctg
gcaaatgtgcctcagtcacgaaccgtaaagagcaacagtctggagctcactccctccaac
accccccagctctccccagctaccactcctgccaacaagaagaacagactacccatagct
gctcgcagccgtagccgtaccaacattgcccaggagggggaggcagaggccagctcccaa
gagtctctgcaggaactgatgccagaggaggtgctggtgatttcattgggaactggtcct
cagactgtccctgggatgatgtcagagaatgaggttttgaacttgcagatggctgatgga
gcccaaggggatggtcatgccgatgatactaagctgcatggtaaaccagacaaaaccctg
cgcttctctctctgcagtgacaacttggaaggcatctcagagggtccatccaatcgttct
aactctgtgtcatctctggacctggagggagagtctgtgtctgagctgggagctggacca
tcagggagcaatggggtggaggctctacaactattggagcatgaacaggccaccacacag
gacaacctggatgacaaactccgcaagtttgaaatcagagatatgatgggcctgacggat
gatcgggacatctctgagacggtcagtgaaacctggagcactgatgtgcttggcagtgac
tttgacccaaatatggatgaagatcggctgcaggaaatagcaggggcagcagcagagaac
atgcttggcagcctgctgtgtcttcctggctcgggttcagttctgctggacccctatgga
tccaccatctcagagaccacaagtgaggcctggagcgtggaggtcctgcccagcgactca
gaagccccagacctgaagcaggaggagcgactgcaggagctggagagctgctctggggtt
ggcagtacctcagatgacactgaggtcagagaagtcagctcgaggcccagcacaccaggt
ctcagcgttgtctcagggatcagcgcaacctcagaagatatccccaacaagatcgaggac
ctgaggtcagagtgcagctcagactttggagggaaggactcggtgaccagtccagatggg
gaggagtcaggccacggagcacaccatctgacatctccaccttcgcaggccgattcttta
ctggccatgtttgatcccctctcctctggtgaaggctcctccactggaacaatagtgagg
cccaaagtgcactacgccaggccccctcaccctcctcccgatcctcctatccctgaagcc
agtgccctggggcaggagactcgccactctcttttcacgccccactgcttggcccaggct
gagctggaacacacgaaacagcgccactccttccctgacaggctggtccgcagccgtagc
tctgacatcgtgtgcccagggcgccggcccacaagtgacccaggccttaaccgacgggta
gcagttgaagagcgtgaccctgccggggccttcgccttaggaccatcctcatcccccagc
aaggactccctgaaaggagaggttgaggacaggaaagacagtgatgatgagaaatctgat
cgcaacagaccgtggtggaagaaacgttttgtgtcagccattcccaaagctccaattgca
gcatttaggaaaagggacaaacaggagaaagatgagattgcccaggaacgtgtcccacaa
gatgacccactgcccagacagagctcgcaaacccaggcagctgaagacatcttggacaag
tacaggaacatcaagaggaccagcccaagtgatggagccacagctggagcctcctatgat
ggtacaggagatctttgtgttgaggacagtgtacatgactctccaagagaagacactctt
caaaacatttccacagatgacctcccagactcggccagccagacagcacagcagcatgac
tcaaagttctctttcagtgatgcaaagaagaagttgaggttggcattgtgttctgcagac
tcagttgctcttcccatcatggctcctgcagcaacaaggaatgggctgcctgatcacatg
gaccctgaagacaatgagatcgtctgcttcctgaaggtccagctagcagaggccatcaac
cttcaggataaaaaccagatggcacagatacaagagaccacgcgctgtgtcagccgcttc
gatccacgcacctgcaggaagctgctggctgctattgcagaggattacaggaagcgggca
ccgtacatagcttatctaaccaggtgtcgccagggcctgcagacctctcaggctcatttg
gagaggctcctccagagggtgctgagagacaaggaggtggcgaaccgctacttcaccacc
gtctgtgttcggctccttcttgaacatatggagtccaagatgcttgacttcattaaagcg
ttccaggtttgcacagcagctgatgacaagacagcagcggtggaggattttctgcgctac
ttgtatggtgccatggcccgtgatgccatttggcagtatgcaagtgaagaccagctgcag
gatgcccagatggctatcgagcgcagcgttatgaaccgcatctttaaactggccttctac
cccaatcaggatggagatattctcagagaccaacttttccatgaacacatccagcggctc
tcgaaagttgtgacagcaaatcataaagctcttcaaatcccagaggtttacctgaaggaa
gctccgtggccctcagcgcagtctgagatcaggaccatcaatgcatacaagacgccacga
gacaaagtccagtgtatactgcgtatgtgttccaccatcatgaatcttctcagtctggcc
aatgaagactccgtccctggagcagatgactttgtccctgtacttgtctttgtcctcata
agggcaaacccgccctgcctgctgtccaccgttcagtacatcaataatttctacgccagc
cggctgagtggggaggagtgctattggtggatgcagttcaccgcggcggtggaattcatt
aagaccatcgacgatcgcaagtga
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integrated database retrieval system
