KEGG   Amphiprion ocellaris (clown anemonefish): 111585424
Entry
111585424         CDS       T06018                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111585424 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aoce03019]
    111585424 (wdr82)
   03036 Chromosome and associated proteins [BR:aoce03036]
    111585424 (wdr82)
Messenger RNA biogenesis [BR:aoce03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     111585424 (wdr82)
Chromosome and associated proteins [BR:aoce03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     111585424 (wdr82)
    COMPASS/SET1 complex (yeast)
     111585424 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_HPS5 Beta-prop_DCAF4 MinC_C VPS8_N
Other DBs
NCBI-GeneID: 111585424
NCBI-ProteinID: XP_023150671
Ensembl: ENSAOCG00000017700
UniProt: A0AAQ6AFH6
LinkDB
Position
5:35423725..35428124
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDE
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctaacggacaatgtgctgcggagcttcagggttgctaaagtgtttcgagaaaac
tcagacaaaatcaactgcttcgacttcagttcaaacggagaaactattatttccagtagc
gacgacgactcgttagtgttgtacgactgccaggagggaaaacccaagaggactctctac
agtaaaaaatatggagttgatctgatcaggtacacacatgctgcaaacactgtggtctac
agttccaacaaaatcgatgatactatccggtacctgtccctccatgacaacaaatacatc
cgctattttccaggacataacaaaagagtgacgtcgctctccatgtctcctgtggatgac
acatttatttctggttcattagataaaactatcagattatgggatttgcggtcacctaac
tgccagggtctgatgcacctgcaggggaaaccagtgtgttcctttgatccagagggcctc
atttttgctgctggaataaattcagagatggtcaaactttatgatctgcggtcatttgac
aagggtccctttgcaaccttcaagcttcagtatgatcgaacatgtgagtggactggactc
aagtttagcaatgatggaaagctcattcttctctctactaatggaggagcccttcgcatt
ttagatgctttcaagggtgctgtactacattcctttgggggctataacaacagtaaaggt
gtgacattggaggcttcgtttactcccgattctcagtttgttatgatcggctctgaggac
gggaagatccacgtgtggaacgcagaaagtggcatgaaggtggctttattagacgggaag
cacacaggcccgatcacctgcctgcagttcaaccccaagttcatgacgtttgcaagtgcc
tgctccaacatggcgttctggctgcccaccattgatgagtga

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