Amphiprion ocellaris (clown anemonefish): 111585596
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Entry
111585596 CDS
T06018
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aoce01009
]
111585596 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111585596 (hdac6)
04131 Membrane trafficking [BR:
aoce04131
]
111585596 (hdac6)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111585596 (hdac6)
Enzymes [BR:
aoce01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111585596 (hdac6)
Protein phosphatases and associated proteins [BR:
aoce01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111585596 (hdac6)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111585596 (hdac6)
Membrane trafficking [BR:
aoce04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111585596 (hdac6)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
111585596 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
111585596
NCBI-ProteinID:
XP_023150926
Ensembl:
ENSAOCG00000011803
LinkDB
All DBs
Position
8:complement(123271..150725)
Genome browser
AA seq
1074 aa
AA seq
DB search
MQSGSVPPEPGLKSVRRSPRLSPQVNSEAEQQRGGNLQEAKMRGRLKMMERSREEDLSDH
LKTLDLSSCLAVGSGTGLVYSEKFTVHQNQWDSSHPECPERVTSIMAELDRRQLASLCVQ
VQPREAAEEELLLVHTKRYVDTMRLTQTMTQTELQTLSNKYDSVYLHPDSFQVCALAVGS
VLQLVDQVLTSELRNGFAIIRPPGHHAQMEEANGFCIFNNVAIAARYAQRKHAVSRVLIV
DWDVHHGQGIQYVFQEDPSVLYFSVHRYELGSFWPHLSESDSHFVGSGRAEGRNINIPWN
KTEMTDADYITAFQHVLLPVAYEFQPQLVLVSAGFDAAVGDPKGEMCVSPQCFHVLTHML
MSLAEGRLVLALEGGYNLQATAEGAAACVVALLGGACPPLNPPTAPSDSALQSISQTVTA
LYPHWPSLQVHEGGPLAEGHVIRETTKEMDKKPGLAPSVAMVTGLVYDERMMEHLNMWDR
HHPEQPQRIFKIFSKHQQLGLVDRCQRIPARLATEEELSMCHSLQHIEQMKATAAMKPRE
LHKLGDEFNSIYINNQSFQSAQLAAGGCFSAVDSILGGQVSNGVAIVRPPGHHAEMDAPC
GFCFFNTAALAAHYAQKISHDPLLRVLILDWDVHHGNGTQHMFEDNDSILYISLHRYDNA
TFFPSSEDAAVDRVGVAKGEGFNVNVAWSGGRMGDSDYLAAFHHIVMPIATEFNPSLVLV
SAGFDAARGDPLGGYHVTPEGYAHLTHMLMSLAGGRVLLILEGGYNLSSISDSMTMCTSV
LLGDPPPSLARPLPPPHRSAVATINEVIRHHAPYWRTLRIHIPQSVLAALPSPKHRGKRS
SKGNSRKSEQNTANRSPSADATARCSLEQLTQGLACLDISQISATSTPVGGARPKVRLSP
EEEPGDVTPELSQSAELPQKITVATPQLFTTGDKAAEGEGAEPETEGACGWSKPQASLEL
STLYVVDPLPWCPHLDAVKPLPPSGVDVLLPCEDCGSDAENWICLTCYQVLCGRYVNEHM
VSHGVVSQHPLVLSFSDLSVWCYLCEAYVHNQILFEAKNAAHCAKFGEEIPGWS
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggatcagttcctccagaacctggactgaagtctgtccgaagatctcctcgt
ctgtccccccaggtaaacagtgaagccgagcagcagagaggaggcaacctgcaggaggcc
aagatgagagggaggctgaagatgatggagaggagcagagaggaggatctgagcgaccac
ctgaagacactggatctgtccagctgcttagcagtgggttctggaactggtcttgtttac
tctgagaaattcaccgtccaccagaaccagtgggactccagccatccagagtgtccggag
cgggtgacgtccatcatggcggagctggacagacggcagctggcgtctctgtgtgtccag
gtccagcccagagaagctgcagaagaagagctgctgctcgttcacacgaaacgttacgtg
gacaccatgaggttgactcagacgatgacgcagacagaactccagactctgtccaacaaa
tacgactctgtctacctccatcctgattccttccaggtgtgtgcactggcggtcgggtcg
gttctgcagctggtcgatcaggttctcacctcagaactcaggaacggatttgccatcatc
agacctccaggtcatcacgcccagatggaagaggccaacggtttctgtatcttcaacaat
gtagcaatcgcagctcgctacgctcagaggaaacacgccgtcagcagggtgctgatcgtg
gactgggatgtccatcatggtcagggtatccagtacgtgttccaggaggatcccagtgtc
ctgtacttcagtgtccacaggtatgaacttgggtctttctggcctcacctgtcagagtct
gacagccattttgtgggcagcggacgagcagaaggaagaaacatcaacattccctggaac
aagacagagatgactgatgctgattacatcactgccttccagcacgttctgctgccggtg
gcctacgagttccagcctcagctcgttctggtctctgctggatttgacgctgcagtcgga
gatcctaagggcgagatgtgtgtgagtcctcagtgtttccatgttctcactcacatgttg
atgagtttggctgagggtcgactggtcctcgctctggagggaggttataacctgcaggcg
acagcagagggcgctgcagcctgtgttgtagctctgctgggcggagcttgtcctccactg
aacccacccactgctccgtctgacagcgctctgcagtccatctctcagacggtcacggct
ctgtatccacactggccctccctgcaagtccacgaaggcggcccattggctgagggacat
gtcatcagagaaactacaaaggagatggataagaagcctggccttgccccctctgttgcc
atggtaacaggtctggtttatgatgagaggatgatggaacacttgaacatgtgggacaga
catcaccctgaacagcctcagagaatctttaagatcttctccaaacatcagcagctgggc
ttagttgatcgttgccagcggataccagcccgcttagcgacagaggaggagctatccatg
tgtcacagcttgcagcacatcgagcagatgaaggccacggcggccatgaagcccagagag
ctgcacaaactgggggacgagttcaactccatctacatcaacaaccagagcttccagtct
gcccagctggcggccgggggctgcttcagcgctgtcgacagcatcctgggaggacaggtg
agtaacggtgtggccattgtccgtccacctggtcaccacgctgagatggatgctccctgt
ggcttctgttttttcaacacagcagcacttgctgctcactacgcccagaagatctcccat
gatcctctgctgcgagtcctgatcctagactgggacgttcaccatggcaacgggactcaa
cacatgtttgaggacaatgacagcattctgtacatctctctccatcgctacgacaacgct
accttcttcccgtcttcagaggacgccgctgttgacagggtgggcgtggctaagggggag
gggtttaatgtcaacgtggcatggagcggagggcggatgggcgattctgactacctggct
gcttttcaccacatcgtcatgccgattgctaccgagtttaaccccagtctggttctggtg
tcggccgggtttgatgctgctcggggcgacccgttgggtggatatcatgtgaccccagag
ggatatgcccacctcacacacatgctgatgtcactggccggagggcgtgtcctgctcatc
ttagaggggggttataacttgtcgtccatctcggactctatgacgatgtgcaccagtgtg
ttgctaggagaccctcctccgtccttagcaaggcccctcccccctcctcaccgcagcgcc
gtggcaacgatcaacgaggttatccgtcatcacgccccctactggcggaccctgaggata
cacattccacagtcagtgctggccgctctgccgtccccaaagcatcgtgggaaacgtagt
tctaaaggaaacagcaggaagtcagagcagaacaccgccaacagatcgccatctgcagat
gccacggcacggtgcagtctggagcagctcacgcagggattggcctgtttggacatcagt
cagatctcagctacgtccacgccggtgggcggggccaggccaaaggtccgcttgagcccg
gaagaggagccaggtgatgtcacacctgagctcagccaatcagcagagctgcctcagaag
atcaccgtggcaacgccacagttattcaccactggagacaaagctgcagaaggagagggg
gcggagccagagacagagggagcgtgtggttggtcgaagcctcaggcatctctggagctg
tccactctgtatgtggtcgaccccctgccgtggtgtcctcacctggacgccgtgaagccc
ctcccaccttcaggtgtcgatgtcctcctgccgtgtgaggactgcggctctgacgctgag
aactggatctgtctcacctgttaccaggtgctctgtggtcgctacgtgaacgagcacatg
gtgtctcatggcgtcgtctcccaacacccgctggtgctgagcttctctgacctttcagtg
tggtgctacctgtgtgaggcgtacgtccacaaccagatcctctttgaggctaaaaacgct
gctcactgtgccaagtttggagaagagattccagggtggagctga
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integrated database retrieval system
