Amphiprion ocellaris (clown anemonefish): 111585640
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Entry
111585640 CDS
T06018
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111585640 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111585640 (prpf8)
Spliceosome [BR:
aoce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111585640 (prpf8)
Complex C
U5 SnRNP specific factors
111585640 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
111585640
NCBI-ProteinID:
XP_023150954
Ensembl:
ENSAOCG00000010725
LinkDB
All DBs
Position
7:7760832..7778530
Genome browser
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPPAMPPGVPPPAPIPDYMSEEKLQEKARKWQQLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPEEDGSVVEWFYEHQPLKDTAKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaccttcccctacagaggggtcccaccagcgatgccaccaggtgtaccccca
cctgcgcccatccctgactacatgtctgaggaaaaactgcaagagaaagcaagaaaatgg
cagcagctgcaggcaaagcgctactccgaaaagagaaagtttggctttgtggacgctcag
aaggaagacatgcctcctgaacatgtccgcaaaatcatcagggaccatggagacatgacc
aatagaaagtttcgccatgacaagagggtctacctcggtgccctcaagtacatgccccac
gcagtgctgaagctgctggaaaacatgcctatgccctgggaacagatccgagatgtgcct
gtactctaccacatcacaggagctatttcctttgtgaatgaaatcccttgggtcatagag
ccagtgtacattgctcagtggggcaccatgtggatcatgatgcgtcgtgagaagcgtgat
cgtcggcacttcaagcgtatgcgctttccaccatttgatgatgaggagccgcctctggac
tatgctgataacatattggatgtggaacctctggaggccattcagatggagcttgatccc
gaggaagatggctcagttgtggagtggttctatgagcatcagcccctcaaagacactgcc
aaatttgtgaatggcaccacctatcggcgctggcagttcactctacccatgatgtccacg
ctgtaccgtctggccaatcagctgctgacggacctggtggatttcaattacttttatctc
tttgacctcaaggccttcttcacttctaaggccttaaacatggccatccctgggggacca
aagtttgagccgttggtcagagacatcaacctccaggatgaagactggaacgagttcaat
gacatcaacaaaattatcatccgacagcccatcaggacggagtacaagattgccttcccc
tacttgtacaacaacttgccgcaccatgttcatctcacctggtaccacacaccaaatgtg
gtgtttatcaagacagaggatccagatctaccagcattctactttgacccgctgatcaac
cctatttcacacagacattctgtcaagagccaagagcctctgcctgatgacgatgaagag
tttgagcttcctgagtatgtggagcctttccttaaagagaccccactctacacagacaac
actgccaatggcattgctctgctttgggcaccgagacccttcaacctccgatctggtcgc
acaaggcgcgccattgatatccccctgatcaagaactggtaccgcgagcattgccctgca
ggacaaccagtgaaagtgcgtgtgtcgtaccagaaactgttgaagtactatgtgctcaat
gctctcaaacacagaccacccaaagcccagaagaagaggtatctgttccgctcctttaag
gccacgaagttctttcagtccaccaagctggactgggtggaggtcggcctacaggtgtgc
agacagggctacaacatgctcaatctgctcatccaccgtaagaacctcaactatctgcat
ctggactacaacttcaacttgaagcctgtcaagacactgactacaaaggagagaaagaag
tccagattcggcaatgccttccatttgtgcagagaggtgctacgtctgagcaagctggtg
gttgacagccacgtgcagtacagactgggaaatgttgacgctttccagttggctgatggg
ctgcagtacatcttcgctcatgtgggtcagctgacaggcatgtaccgctacaagtacaag
ctgatgagacaaatccggatgtgcaaagacctgaagcatctcatctactacaggttcaac
acaggtcctgtgggcaaaggtccaggttgtggcttctgggctcctggctggagagtgtgg
ctgttcttcatgaggggcatcactcctctgttggagaggtggctgggaaatctgctggcc
aggcagtttgaaggacgtcactcaaagggtgtagccaagactgtgaccaaacagcgtgtg
gagtctcactttgacctggagttgcgtgccgcagtgatgcacgacatcttggatatgatg
cctgagggcatcaaacagaacaaggccagaaccatcctgcagcatctcagtgagtcctgg
aggtgctggaaagccaacattccctggaaggtgcctggcctgcccactcccattgagaac
atgatccttcgttatgtgaaggccaaagctgactggtggaccaacacagctcattacaac
cgtgagcgaattcgtcgtggagccactgtggacaagacggtgtgcaagaagaatctgggc
agactgacccgtctgtacctgaaagctgagcaagagcgacagcacaactacctgaaggat
ggtccctacatcacagcagaagaagcagtagccatttacaccacaactgtgcactggctg
gagagtcggcggttctcgcccatccctttccctcctctgtcctacaaacacgacaccaag
ctgctcatcctggccctggagaggctcaaagaggcctacagtgtgaagtctcgtctgaac
cagagtcagagggaggagctgggactgatagagcaggcctacgacaatcctcacgaggcc
ctttccaggatcaaacgtcacctgctcacacagagagcattcaaagaggtgggtattgag
ttcatggacctttacagtcacttggtgccggtgtacgatgtggagcccctggagaagatc
acagacgcctacctggaccagtacctgtggtatgaagcagacaaaaggcgcctgttccca
ccctggatcaaacctgctgacactgaaccaccaccactgctggtctacaagtggtgccaa
ggcatcaacaacttacaggacgtgtgggagactgctgagggagagtgcaacgtgatgctg
gagtcccgctatgagaaaatgtatgagaagattgatctgacgttgctcaacaggctgctg
cgtcttattgttgaccacaatattgctgattacatgacagccaagaacaacgtggttatc
aactacaaggacatgaaccacaccaactcttacggcatcatcaggggactccagtttgcc
tcattcatcgtgcagtattacggcctggtgatggacctgctggtgctcggcttacaccga
gccagtgagatggctggcccacctcagatgccaaatgacttcctcagtttccaggacacg
gccacagagagcgctcacccaatcagactgtactgccgctacatcgaccgtatccacatc
ttcttcaggttctctgctgatgaggccagagacctgatccagagatatctgacagagcat
ccagaccccaacaatgagaacatagtgggttacaacaacaagaagtgttggcctcgtgac
gcccgcatgagactgatgaagcatgatgtcaacctgggacgtgccgtgttctgggacatc
aagaatcgcctgcccaggtctgtgaccacagtccagtgggagaacagctttgtgtcggtc
tacagcaaagacaaccccaacctgctcttcaacatgtgtggctttgagtgccgcatcctc
cccaagtgccgcaccagctatgaggagtttactcacaaggatggtgtctggaacctgcag
aatgaggtaaccaaagagaggacagcacagtgtttcctgcgtgtggatgatgaatcaatg
cagcgtttccacaacagagtgcgtcagatcctgatggcctctggctccacaaccttcacc
aagatcgtgaacaaatggaacacagctctgattggtctgatgacctacttccgtgaggct
gtcgtcaacacccaggagctcctggacctgctggtaaagtgtgagaacaagattcagaca
cgtatcaagatcggcctgaactccaaaatgcctagccgcttccctcctgtagtcttctac
actcccaaggagttgggtggccttggcatgttgtccatgggccacgtgcttatcccccag
tcagacctgcggtggtccaagcagacagatgtgggcatcacccacttcaggtctggaatg
agtcacgaagaagaccagctcattcctaacttgtatcgttacattcagccgtgggagagc
gagttcattgactctcagagggtctgggctgagtatgccctcaagagacaggaggccatt
gctcagaacagacgtctgactctggaggatctggaggactcgtgggacagaggaatccct
cgcatcaacacactttttcagaaggacagacacacactggcctatgataaaggctggaga
gtcagaacagacttcaaacagtatcaggtgctgaaacagaatccattctggtggacccac
cagaggcacgatggaaaactgtggaacctgaacaactatcgcacagacatgatccaggct
ctgggcggtgtggagggcatcctggagcacacactcttcaaaggcacttacttccccacc
tgggagggtctcttctgggaaaaggccagcggctttgaggagtccatgaaatggaagaaa
ctgactaatgctcagaggtctggtctcaaccagatccccaaccgtcgattcacactttgg
tggtcacccaccatcaacagagccaatgtatatgtgggtttccaagtgcagcttgacttg
acaggaatcttcatgcacggcaagatccccacgctgaagatctccctcattcagatcttc
agggctcacttgtggcagaagattcatgagagcattgtcatggatctctgtcaggtgttt
gaccaggagctggatgccctggagattgagacagtgcagaaggagaccatccatcccagg
aagtcatacaagatgaactcatcctgtgcagacatcctcctctttgcttcatacaagtgg
aatgtctctcggccatcgctgcttgctgactcaaaggatgtgatggacagcaccaccaca
cagaagtactggattgacattcagctccgttggggtgactacgactctcacgacattgag
cgctacgccagggccaaattcctggactacaccacagacaacatgagtatctacccctcc
cccactggagtgctcattgctatcgacctggcttacaacctccacagtgcttatggtaac
tggttccctggaagcaagcctctgatccagcaggccatggccaagatcatgaaggccaac
cctgccctgtatgtgctcagggagcgcatccgcaaaggtctgcagctgtactcctcagaa
cccactgagccgtacctgtcctcacaaaactatggtgaactcttctccaaccagatcatc
tggtttgtggatgacacgaatgtctacagagtcaccatccacaagacctttgagggtaac
ttgaccacgaagcccatcaatggagccattttcatcttcaatcccaggactggtcaactc
ttcctcaaaatcatccacacatctgtatgggctggacagaaacgtctgggacagctggcc
aaatggaagacagctgaagaagtggctgccttgattcgctccctccccgtggaagaacag
ccgaaacagatcattgtaaccaggaagggcatgttggaccctctggaggtccacttgctc
gacttccccaacattgtgatcaagggctcagagttgcagctgcccttccaggcttgtctg
aaggtggagaagtttggagacctgatcctgaaggctacagaaccacagatggtgttgttc
aacctttatgatgactggctcaagaccatctcatcttacacagccttctctcgactcatc
ctgatcctcagagcgctccatgtcaataacgaccgagccaaggtgattctgaaaccggat
aaaacaaccatcacagagccccatcacatttggcccacgctcaccgatgaggaatggatc
aaggtggaggtgcaactcaaagacctcattctggccgattatggcaaaaagaacaatgtg
aacgtggcttcactgacccagtctgagatccgtgacatcatcctgggtatggagatctcc
gccccgtcacagcagcgtcagcaaattgctgagattgagaagcagaccaaggaacagtcg
cagctcaccgccacacagacccgcactgtcaacaagcatggagacgaaatcatcacgtcc
accacctccaactacgagacccagaccttctcctctaagaccgaatggagagtcagggcc
atatctgctgccaacctccacctccgaaccaaccacatctacgtgtcctctgatgacatc
aaggagacgggttacacctacatcctgcccaaaaatgttctcaagaagttcatctgcatc
tcagatctgcgagcacagattgcaggctacctgtatggtaccagcccgccagacaacccc
caggtgaaggagatccgttgcatcgtcatggtccctcagtgggggacacaccagactgtc
cacctgcccaaccagctgcctggtcatgaatacctgaaagaaatggagcccctcggctgg
atccacacgcagcctaatgagtcaccacagctgtccccacaggatgtcaccacacatgcc
aagatcatggctgataacccatcttgggatggagaaaagaccatcatcatcacttgcagc
ttcactccaggctcatgcactctaacagcgtacaagttgacgcctagtggttatgaatgg
ggtcgccagaacacagacaagggcaacaaccctaaaggctacttgccatcacattatgaa
agagtacagatgctactctctgaccgcttcctgggcttcttcatggtgccaggccaagtt
tcctggaattacaacttcatgggcgtgcgccacgatcccaacatgaagtacgacctgcag
cttgccaaccccaaagagttctaccatgaagtccatcggccctcacacttcctgaacttt
gcctccctgcaggagggcgagatctacaacgccgaccgcgaggacatgtacgcctga
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integrated database retrieval system
