Amphiprion ocellaris (clown anemonefish): 111585668
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Entry
111585668 CDS
T06018
Symbol
itga4
Name
(RefSeq) integrin alpha-4 isoform X1
KO
K06483
integrin alpha 4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04510
Focal adhesion
aoce04512
ECM-receptor interaction
aoce04514
Cell adhesion molecules
aoce04672
Intestinal immune network for IgA production
aoce04810
Regulation of actin cytoskeleton
aoce04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111585668 (itga4)
04514 Cell adhesion molecules
111585668 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111585668 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111585668 (itga4)
04810 Regulation of actin cytoskeleton
111585668 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
111585668 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoce04147
]
111585668 (itga4)
04515 Cell adhesion molecules [BR:
aoce04515
]
111585668 (itga4)
04090 CD molecules [BR:
aoce04090
]
111585668 (itga4)
Exosome [BR:
aoce04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111585668 (itga4)
Exosomal proteins of other cancer cells
111585668 (itga4)
Cell adhesion molecules [BR:
aoce04515
]
Integrins
Integrin alpha subunits
111585668 (itga4)
CD molecules [BR:
aoce04090
]
Proteins
111585668 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_3
GNVR
DUF11
Motif
Other DBs
NCBI-GeneID:
111585668
NCBI-ProteinID:
XP_035797397
Ensembl:
ENSAOCG00000009683
LinkDB
All DBs
Position
11:4098939..4140537
Genome browser
AA seq
1036 aa
AA seq
DB search
MGSSAVSVGLRSSLVLVLVPVLVLVLALVLVHPAAGYSLDQDHSLEFSGPRSSMFGYSVL
LHRHKSHSWLVVGAPVANSPYSPSVESPGAVFRCNVTSEHRRCHHMHADVSTCGKTCEAE
SDRQWLGVSLSRQPGDNGGHVLACAHRWKNVYYSKKDSQNNKLPNGVCYRYGSDLGNVQP
IIPCYRDHQRKFGEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVYNTSSRGMSVYL
DDENGAVSFGSYLGYSVGAGHFLSPLSVEVVGGAPQYNQKGKVYIFTVDANMLRVVSEVS
GKELGSYFGSSVCVVDLNADGLSDLLVGAPMATGVAREEGRVHVYINQGQAKLLEVEFQL
SGSDAYAARFGETIADLGDLDDDGYPDVAVGAPQEDDLRGAVYVYNGRKDGVSPTPSQRI
TGSTLGHNLRMFGQSLSSGIDIDDNGYQDVAVGAFLSDSAVVLRTRPVIQVKASLTLPEQ
IDQRVALCHDHKTPTVCLNVTICFSVKSRRFRGPIELQYNLTADLLHKPTFPHRFYFHGN
GSSNSTKGHLRARQGHLICKTHVAYQRKDVRDIFTPVQFEVSYRLKDTNTHRGSSKTFPP
LKPILQQSAGHHNTISNQTWFSRSCSLVNCSTNMQLSTELLLPHQQDYFALGSGQTIMLK
TSVLNSGDDAFLPKLTLRFPDNIHYIKVLQNQDNVVNCDVIQEANTTTVGVDCSVSSLLL
PAKSQLDIGFLLDVNQSSTPGNISIHVNTYSDNYEKEEYLHDNSMRLTFPLRYGLNVNIH
GFVTPTSFVFGDEDLIPADCYSERFNYTYKVLNSGPSRSVDTVIDIALPKILTPYEHRLL
KVLEWQSSQGVCSISDTTVSVNEDCDVPQASFIKQLVFFFSPTSTRRMFCGRSDTLCERL
VCRLGNLEAGRDATIKLEISLNPAVLLQAPGRHGIMLLESTAMMSSPRNDSHTIIIQDQP
VAQVVVEAVFTQKPSMPVKIFIIVVSLVLGLMILAALIWCLWKAGFFKRDFQKKQEEFNR
DSWDYVPKLDKRESTT
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcagcggtcagcgttggtttgcgctccagcctggtcctggtcctggtcccg
gttctggtcctggtcctggctctggttctggttcatcctgctgcaggatacagtctggat
caggaccacagtctggagttcagcggtcctcgctcctccatgtttggatactcagtcctg
cttcatcggcacaaatctcacagctggttggtggttggagctccagtagcgaactcgccc
tatagtccatcggttgaatctcccggtgccgttttccgctgcaacgtcacgtctgagcac
cggcgctgccaccacatgcatgccgacgtgtcgacgtgtgggaagacgtgtgaagcggag
agtgaccgccagtggctgggagtcagtctgtccagacagcctggagacaacggaggacac
gtcctggcatgcgcacaccgctggaagaacgtctactactcaaagaaagacagtcagaac
aacaagctgcccaacggcgtctgttatcgctacggcagcgacctgggaaacgtccaaccc
atcatcccctgttacagagaccaccagaggaagttcggtgaggattatggatcatgtcag
gcaggaatttccaacttcctgactgaggatctgatcatcatgggggcaccggggacgtct
tattggacgggttcggttctggtctataacacgtccagcagagggatgtcggtgtacctg
gatgacgagaacggagccgtcagctttggaagctacctgggctattctgtcggagccggt
cacttcttgagtcctctaagtgtggaggtggtgggtggagctccgcaatacaaccagaag
ggcaaggtctacatcttcactgtagacgccaacatgctgcgagttgtctctgaagtgtcc
ggaaaagagctgggatcctacttcggctccagcgtttgtgtcgtggacctgaacgccgac
ggtttgtcagacctgttggtcggcgctcccatggcaacaggcgtcgccagagaggaagga
agagttcatgtgtacatcaaccagggacaggcgaagctgctggaggtcgagtttcagctg
agcggcagcgacgcctacgccgcccggtttggagaaaccatcgccgacctgggagacctg
gacgacgacggttaccccgatgtggcagttggtgccccacaggaagacgacctcagagga
gctgtctacgtctacaacggcaggaaggacggtgtttcaccgactccatctcagaggatt
actggatccactctgggtcataacctgcggatgttcggtcagtcgctgagttctgggatt
gacattgatgataacggctaccaggatgtggcggttggagcgttcctctcggactcggct
gtggttctcaggacccgtccggtgattcaggtgaaggcgtctctgactctgcctgagcag
atcgaccagcgggtggcgctgtgtcacgatcacaagactccaaccgtctgcctcaacgtg
accatctgcttcagtgtgaagtccaggcggttcagaggacctatagaacttcagtataat
ctgaccgctgacctcctccataaaccgaccttccctcatcgcttctatttccacggtaac
ggatcatccaatagcacaaagggacatctgagagcgcgacaaggacacctgatttgtaaa
acgcatgtggcttaccaaaggaaagatgtgagggacatttttactccggttcagtttgag
gtttcctaccgtctgaaggacacaaacacccacagaggttcatccaaaaccttccctccg
ttgaagccgattctgcagcagagtgcaggacaccacaacaccatctccaaccagacgtgg
ttctctcgttcctgctctctggtgaactgttcgaccaacatgcagctgtcgactgaactt
ttgcttccacatcagcaggactacttcgctctgggctccggacagaccatcatgttgaaa
acttcggtgctgaactctggagacgacgccttcctgcccaaactgacgctgcgattcccc
gacaacatccactacattaaagtgctgcagaaccaggacaacgtggtcaattgtgacgtc
atacaggaggcgaacacgacaacggtgggcgtcgactgcagcgtctccagcctccttctt
ccagctaaatcccagctggatatcggctttctgttggacgttaaccagagcagcacacct
ggtaacatctccattcacgtcaacacttacagtgataactatgaaaaggaggagtatctc
catgacaactccatgaggctcacgtttcctctcagatatggactcaatgtcaacatccac
gggtttgtgactcccacctcatttgtgtttggagatgaagatctgattccagctgactgc
tactctgagagattcaactacacatacaaggtgttaaactctggacccagcaggtcagtg
gacactgtgatcgacatcgcactgccgaagatcctcacaccttacgaacaccgactgctg
aaggtgctggagtggcagtcgtctcagggtgtttgttcgatcagcgacacgacggtttca
gtcaacgaggactgtgacgtccctcaagcttccttcatcaaacagcttgtcttcttcttc
tcgcccacatccacacgcagaatgttttgtggccggagcgacacactgtgtgagcggttg
gtgtgtcgcctcggtaacctggaggcggggagggacgctaccatcaaactggagatcagc
ctgaaccctgctgttctactgcaagctccgggtcgccatggcatcatgttgttggagagc
acagcaatgatgtcgtctcccagaaatgattctcacaccatcatcatccaggatcaacct
gtagcacaggtggtggtggaagctgtttttacccagaaaccctccatgccggtgaagatc
ttcatcatcgttgtcagtttagttctgggcctgatgatcctggctgctctcatctggtgc
ttgtggaaggctggtttcttcaagagagacttccagaagaagcaggaggaattcaacagg
gacagctgggactatgttcctaaactggacaaaagagaaagcactacttaa
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