Amphiprion ocellaris (clown anemonefish): 111585824
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Entry
111585824 CDS
T06018
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04020
Calcium signaling pathway
aoce04080
Neuroactive ligand-receptor interaction
aoce04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111585824 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111585824 (grin1b)
04082 Neuroactive ligand signaling
111585824 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111585824 (grin1b)
Ion channels [BR:
aoce04040
]
Ligand-gated channels
Glutamate (ionotropic)
111585824 (grin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
111585824
NCBI-ProteinID:
XP_054867234
Ensembl:
ENSAOCG00000000232
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All DBs
Position
6:782562..855402
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AA seq
939 aa
AA seq
DB search
MLPRGVLLLAVLQCCSVALCGCEPRQVNVGAVLSQKRYEQVFKEAVLQANALYGRDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFRWNHIILIVSDDHEGRAAQKRL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSPETNLTALLLEAKDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMTGKALSEAPDGLLGLQLINGKNESAH
IADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNYQQKPGRLVQVGVFNGSQVVMNPQRKIIWPGGETEKPVGYQMSTK
LKIVTIHQEPFVYVKPTKTDGTCKEEFTVNGVLIKKVICTGPNGTIPGQPIVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPESKTSFR
SITATSDLKRRKASGDVTPYPTDITGQLNLSDPSVSTVV
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgttgccccggggtgtgctgctgctggcagtgctgcagtgctgctcggtggcgctgtgt
ggctgtgagccccgccaggtgaacgtgggggcggtgcttagccagaagcgctatgagcag
gtgttcaaggaggcggtgcttcaggccaacgctctgtacggacgggacaagttcaagatg
aacgccatctcagtgacgcataaacccaacgccatccagatggcgctgtccgtctgcgag
gacctcatctccaaccaggtttatgccatcctggtcagccatcctcctcagtccaacgac
cacctgacgccaacgcctgtctcctacacggccgggttctaccggatccccgtggtcggc
ttgacgacacgcatgtccatctactccgacaagagcatccacctgtccttcctgaggacg
gtgcctccatactcccaccaggcccacgtctggttcgacctgatgagagagttcaggtgg
aaccacatcatcctgatcgtcagcgacgaccacgaaggccgagctgctcagaagagactg
gagacgctgctggaggagcgagagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacccaaggccgagaaggttctgctgttcagcccg
gagaccaacctgacggcgctgctgctggaggccaaagacctggaggcccgagtcatcatc
ctctccgccagtgaggacgaggctgctgccgtctacaaagctgcccggcagctcaacatg
accggttctggttacgtctggctggttggagaacgagagatgacgggcaaagctctgagt
gaagctccagacggcctactgggcctccagctgattaacggtaagaacgagtcggcccac
atcgctgacgccgtggcggtggtcgctcagtcactgcaggagctgtttgagaaggagaac
atcacggagcctccgcggggctgcgtaggaaacaccaacatctggaggaccgggccgctc
ttcaaacgggtgctgatgtcatcgaagtaccctgacggcctgacgggacgaatcgagttc
aatgacgacggtgaccggcgcttcgccacctacagcatcctgaactaccagcagaaaccg
gggcgcctcgtccaggtcggagtcttcaacggctcacaggtcgtcatgaaccctcagagg
aaaatcatctggcctggaggagaaaccgagaaaccagtcggatatcagatgtcgacaaaa
ctcaagattgtgactatccaccaggaaccttttgtttacgttaaacctacgaagactgac
gggacatgtaaggaggagttcaccgttaatggagttctcatcaagaaggtcatctgtacc
ggacccaacggaaccataccaggtcagcccatcgttcctcagtgttgctatggtttctgc
atcgatctgctcatcaagctggccatgagcatgaacttcacctacgaggttcacctggtg
gctgacggcaagtttggaacgcaggaacgggtgaacaacagcaataagaaggagtggaac
gggatgatgggggagctgcttggaggtttagccgacatgatcgtagctcctctcaccatc
aacaatgagcgcgctcagtacatcgagttctccaaaccgttcaaataccaggggctcacc
atcctcgtcaagaaggaaatccctcgcagcactctggattcgttcatgcagccgttccag
agcacactgtggctgttggtcggtctgtcggtccatgtggtggcagtgatgctttaccta
ctagaccggttcagcccgtttggaaggtttaaagtgaacagtgaagaagaagaagaagac
gccctcaccctgtcctcggccatgtggttctcatggggagtactgctcaactctggcatc
ggagagggagctccgcggagcttctcagccaggattctggggatggtgtgggcaggattc
gccatgatcattgtagcttcctatactgccaacctggcagccttcctggtgctggaccgg
cctgaggagcgcatcactggcatcaatgaccccaggctgcgtaacccatcagataagttc
atctacgccacagtgaagcagagctcggtggatatctacttcagacggcaggtggagctg
agcaccatgtaccggcacatggagaaacacaactatgagagtgccgctgaggccatccag
gctgtccgagacaacaaactccacgccttcatctgggacagcgctgtgttggagttcgag
gcgtcgcagaagtgcgatctggtgacgacgggagaactgttctttcgctccggctttggg
atcggaatgaggaaagacagtccgtggaaacagaatgtttctctggctattctcagctct
catgagaatggcttcatggaggacctggacaagacgtgggttcgataccaggagtgtgac
tcgaggagcaacgcgccggcgaccctcaccttcgagaacatggcaggtgtgttcatgctg
gtcgccggaggaatcgtcgctgggatcttcctcatcttcatcgagatcgcctacaaacgg
cacaaagacgctcgcaggaaacagatgcagctcgcctttgccgccgtcaacgtgtggagg
aagaacctgcaggataggaaaagtggtagagcagagcccgagtccaaaacctcttttagg
tccatcactgccacctccgacctcaaacgccgtaaggcctccggggacgtaacgccgtat
ccaactgatatcaccggacagctcaacctatcagatccctccgtcagcaccgtggtctga
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