Amphiprion ocellaris (clown anemonefish): 111586206
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Entry
111586206 CDS
T06018
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
111586206 (tmc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aoce02000
]
111586206 (tmc1)
03037 Cilium and associated proteins [BR:
aoce03037
]
111586206 (tmc1)
Transporters [BR:
aoce02000
]
Other transporters
Pores ion channels [TC:
1
]
111586206 (tmc1)
Cilium and associated proteins [BR:
aoce03037
]
Other cilia and associated proteins
Stereociliary proteins
111586206 (tmc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
COX16
Na_K-ATPase
UPF0542
Motif
Other DBs
NCBI-GeneID:
111586206
NCBI-ProteinID:
XP_023151666
Ensembl:
ENSAOCG00000012951
LinkDB
All DBs
Position
6:complement(18844950..18856401)
Genome browser
AA seq
968 aa
AA seq
DB search
MPRDSLITSEDDIDVGLDLAGEDEVFSSNEGHERERHRGKRRDGDGEKKKRKKRRRKGAH
RAEEGEDEVQTRHERREREKRRRAKNDQEAKGRERDEEERVQTTSGKVAKTKKNIRNENT
RRRVEEEEVEVEERLEKRKKKHGSAKKEEKKEDEGKQMVKEKEREVKKKKHKKVVETSSE
QETSEEEDDKEEDSKDEEMRPECLTPEELEKLKEAVDERKKLIQSLRGKPWPMKKKLVTL
RESQEFVEKYEGALGKGKGRKLYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEIESH
FGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSMPRKTVPRSEETSAMDF
AVLWDFGGYAQYSVLFYGFYNNQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNA
NESGVGDDNSFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAILEEQESHKDDNIHL
TRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSLLGMFC
PMLFDVISTLENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEKIVKFNIT
TWEASLYNGTISENSTAPSITINPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGD
FLRAVLVRFLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVL
RLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFD
CGPFSGKNRMFDVIHETLESDFPAWFSKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSY
RQANVELKKKLQTQNEENKKKNKRAALKAQMDLEEARKAASQAAEEQKNNNASLQGQEAD
EEENYVSSHRLYHGKNGRNPPPMNGDRQLLASRAPGPRTYHHGNHGASGYLPGFSEPRMC
RVPSLQRH
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagacagtctgatcacctcagaggatgacattgacgttggactggatttggca
ggtgaagacgaagttttctcttctaatgagggacatgagagggaacggcatagaggaaaa
agaagagatggcgatggagagaaaaagaagaggaaaaagaggaggagaaagggagcacat
agagcagaagaaggtgaagatgaagtacagaccaggcatgagagaagagaaagagaaaag
agaagaagagcaaagaatgatcaagaagcaaaaggaagagagagagacgaggaggaacgg
gtccaaacaacaagtggcaaagtggcaaaaacaaagaagaatatcagaaatgaaaataca
aggagaagagtggaagaggaggaggtagaagtggaagagagacttgaaaaacggaaaaag
aaacatgggagtgccaaaaaagaggagaagaaagaggatgaaggtaaacaaatggtaaag
gagaaagaacgtgaggtgaagaagaaaaagcacaagaaggtagttgaaacaagctcggag
caggagacgagtgaagaagaggatgacaaagaagaggacagcaaagacgaagagatgagg
ccagagtgtctgacaccagaggagctggagaagctgaaggaggccgtagatgagaggaag
aaactgatccagagtctgagggggaagccctggccaatgaaaaagaagcttgtcacttta
cgggagtcacaagagtttgtggagaaatacgagggagctttggggaaaggaaaaggcagg
aagctgtatgcctacaaggtcatgatgaccaagaaatggatgaagttccaacgggacttt
gagaacttcaaaactgcctgtattccatgggagatgaaaatcaaagagattgaaagtcat
tttggctcttcagttgcctcatacttcatcttcctgaggtggatgtatggcatcaatatg
atactgtttggtctgacctttggcctggttatggtaccagaggcattaatggggcgtcct
tatggaagcatgccaagaaagaccgtccctaggagtgaagagaccagtgccatggacttt
gctgtcctgtgggactttgggggttacgcccagtattcagttctcttctatggtttctac
aacaaccagcgtgccattggctggctcaagttccgcatgcctctgtcatacttcctggtt
ggtgtgggtacagtggcctacagctatatggtggtcataagaacgatggcccgtaatgca
aatgagtcgggggttggagatgacaacagcttcaatttcagctggaaaatgttcaccagc
tgggactacctgataggaaaccctgaaactgcagacaataagtttgcttccatcaccacc
agcttcaaggaagcaatcttagaggagcaagagagccacaaggatgacaacatccacctg
actcgttttctgagagtgctggccaacttcttggtcttgtgctgcttagcaggaagtgga
tacctcatctattttgtagtgcgtcgctctcagaagtttgccctcgatggcctggagaat
cacacctggtgggaaaggaacgaggtgaacatggtcatgtcattactggggatgttctgc
cccatgctgtttgacgtcatcagcaccctggagaactaccaccctcgtgttgccctgcag
tggcagctgggacgcatctttgcactcttcttggggaacctctacacctttatcatcgca
ctcatggatgagatcaaccttaaaagggaagaggaaaagatagtaaagtttaatataacc
acgtgggaagccagtctttataatggcacaatatcagaaaacagcactgctccctccatc
accatcaaccctgctgatgtgcccagaggaccctgctgggagaccatggtgggccaggag
tttgtccgactgatcatatctgacaccatgacaacctacatcacgctgttgattggtgat
ttcctgagagctgtgctcgttcgatttctcaactactgctggtgttgggaccttgaggct
ggatttccgtcctactctgagtttgatgtcagtggaaatgtcctgggtctgatcttcaat
caaggaatgatatggatgggtgctttttatgcgccttgtctgcctgccctaaacgtcctc
cggctccacgtgtccatgtacctgcagtgctgggccgtgatgtgctgtaatgtgccccag
gagagggtcttcaaggcctctggctccaacaacttctacatggccatgttgctggtcatc
ctcttcctgtccacactgcctgccatctacaccatcgtcaccatccctccttcctttgac
tgtggacccttcagtggcaagaaccgtatgtttgatgtgatccatgagacgctggagtcc
gacttccctgcctggtttagtaaagtgttcagctatgcctctaaccctgggctggtcctg
cccttcatactacttatggtactggccatttattacttgcagtccacatctaaaagctac
agacaagctaatgtagagctgaagaaaaaactacaaacgcaaaatgaagaaaacaagaag
aagaacaaacgagcagcactgaaggcgcagatggatctagaggaggccagaaaagcagca
tcacaagctgcagaggaacaaaagaacaacaatgcatcattacaaggccaagaggcggat
gaggaagaaaactacgtcagcagtcacaggttgtatcatggtaagaatggacgcaaccct
cctcccatgaatggagaccgacaactgctggcctccagagcacctggccccaggacctat
caccatggcaaccacggggcttctggctacctgcccggtttctccgagccgaggatgtgc
agagtgccgagcctgcagagacactga
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