Amphiprion ocellaris (clown anemonefish): 111586363
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Entry
111586363 CDS
T06018
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111586363 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111586363 (rad54b)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
111586363 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
111586363
NCBI-ProteinID:
XP_023151822
Ensembl:
ENSAOCG00000008523
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MRRSGAPSQLLGNAFKKPRFVPPGASTSSPLAESKPLSPKLGLGNALDKVQRSLAEPAVS
TTPCPVQPKAAQTASAFSRALARVLGATESKENETKYENPGSGDCAEDNKTAGVFPRSPQ
TPQPPDSSCSQDGARYLSVVWCKASKKKHKRWEGDAVLITRGRTVTLKDMEGKDIGKGSG
YKVSQLASLSEGESLMIGGKEVEVMGIISAEDFAKGRCFQEVQTGQVESSTISAPPPARR
FASKPFCPPTMVGRAEHPGTKPEEEQTCRPRYDPLAPGALVMPRPSFNHQWSNNKSGLPV
VDVVVDPHLTAHLRPHQRDGLLFLYECVMGMRALGRYGAILADEMGLGKTLQSVALSWTL
LKQGPYGGRPEAKRVLVVTPGSLVQNWKAEFNKWLGRERINIFTVDQDHRIEQFVLSPLH
SVLVISYEMLLRCLEQVQKVEFGLIICDEGHRLKNSSIKTSSALSSLSCNRRVILTGTPV
QNDLQEFYAIIEFVNPGILGSSTGYRKVYEEPILRSRQPSCSEEDRVLGEERAAELSRLT
GMFILRRTQEIINRYLPPRLDWTLFCEPSPLQRELYHQLLSHRVFRACLQESVQTHTHLA
CITALKKLCNHPSLLHGTVKEKTDRGSVESSLYEGLVDLFPESYLGGFDAADSGKLLVLS
DLLTAIRQLSPSDRVVVVSNYTQTLDLLQNLCVHSGYTFCRLDGQTPTNQRQRLVDGFNS
PYSQNFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRL
LTAGTIEERIFQRQVSKQGLSGTVVDLGKGSEHTSFSTSELRDLFSLTDTRSLTHDLLNC
NCSMDGSINAAVVEEEEEPAPDRPCQLGRHHGDRGKASQKHLSMSELMQWRHFSGLSGLC
HRMTNPPQLPTTTIQLPTVLNYSAYGVLYAVLCFLFIYSRQFAVKVHEINETQKTFA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctcaggagctcccagccaacttttgggtaatgcatttaaaaagccaagattt
gtgccacctggagcatcaacttcatctcctctagccgaatccaagcctctctcccctaaa
ttgggtttaggcaatgcactggataaggttcagagaagtcttgcagaaccagctgtgagt
acgacaccatgtccagttcaacccaaagctgcccaaactgcttcagccttttccagggct
ctggcacgtgttctcggggcaacagagagcaaagaaaatgagacaaaatatgaaaatcct
ggctcgggagactgtgcagaagacaacaaaacagcaggagtatttcccaggtctcctcaa
acgcctcagcctccagactccagctgcagtcaggatggagcgagatacttgagtgtggtt
tggtgtaaagccagtaagaagaaacacaaacgctgggaaggtgatgctgtgctcattaca
agaggacgcacagtcacacttaaagacatggaggggaaggatattggaaagggtagcggc
tacaaggtgtcacagttggcttcactgtctgaaggagagtctcttatgatcggtgggaag
gaggtggaggtgatggggattatttcagcagaggacttcgctaaaggacgttgcttccag
gaggttcaaactgggcaggtggagtcgagcacaatctctgcgccacctccggctcgtcgc
tttgcatccaaacctttctgtcctcctacgatggtcggcagagcagagcatccaggaacg
aaaccggaggaggaacaaacctgcagacctcgatacgacccacttgctccaggtgcactg
gtgatgcctcgcccctcgttcaaccaccagtggtctaataacaaatcagggcttcctgtg
gtcgatgtcgtcgtggatccacacctgaccgctcacctgcgacctcatcagagagacggt
ctgctcttcctctacgagtgtgtcatgggcatgagagctctgggtcggtacggcgccatc
ctggctgatgaaatgggtttggggaagacgctgcagagcgttgcgttgtcctggacgctg
ctgaagcagggaccttacggtgggagaccggaggcgaagcgtgtcctcgtggtgacaccc
ggcagcctcgtgcagaactggaaagcagagtttaacaagtggttgggcagggagaggatc
aacattttcactgtggatcaggaccacaggatcgagcagttcgtcttgtctcctctgcac
agcgttctcgtcatcagctatgagatgctgctacgctgcctcgagcaggtgcagaaagtg
gagtttggtcttataatttgcgatgagggtcacaggttgaagaacagcagcatcaaaaca
tcctcagcgctcagcagcctcagttgtaaccgcagagtcatacttacaggcacgccggta
cagaacgacctgcaggagttctacgcaattatagagtttgttaatcctgggattcttggg
tcgtccactggttataggaaagtgtacgaggagccgattctacgctccagacagccgtcc
tgctcagaggaggacagagttctgggcgaagagcgagcagctgaactctcccgtctgacc
ggcatgttcatcctgaggcggacgcaggagatcatcaaccgctacctgcctcctcgtctc
gactggacgctgttctgcgagccgtcgcctctgcagcgggaactttaccatcagctgctg
agccaccgagtgttcagagcttgtctccaggaatccgttcagacacacactcacctggcc
tgcatcactgcactgaagaagctctgcaaccaccccagtctgctgcacggcactgtcaag
gagaaaactgatcgtggatctgtggagagttcattgtacgagggcctggtagatctgttc
ccagaatcctatttaggaggattcgacgctgctgactctggaaaactgctggttctgtcg
gatctgttgaccgctatcagacagctcagtccttcagacagggtggtcgtggtgtcaaac
tacactcagacactcgacttactccagaacctgtgcgtccactcgggctacaccttctgt
cgactggacggacagacgcccaccaaccagaggcagcgactggtcgatggttttaacagt
ccttattctcagaacttcctctttctgctgagctctaaggcaggcggcgttggacttaat
ctgattggtgcttcccacctggtgctgtacgacatcgactggaacccggccaatgacatt
caggccatggcccgagtgtggagagatggtcagaagaagacggtgcacatctaccgactt
ctcactgcaggcaccattgaggagagaatatttcagagacaggtgtccaaacaggggctt
tctgggactgtggtggacctggggaaagggtcagagcacacgagtttctccaccagcgaa
ctgcgagatcttttcagcctgacggacacgcggtcgctgacccacgacctgttgaactgt
aactgcagcatggacggttcaatcaacgccgccgtcgtggaggaggaggaggagccggct
cctgataggccgtgccagcttggtcgtcaccacggcgaccggggcaaggcgtcacagaag
cacctcagcatgtcggagctcatgcagtggcggcatttctccgggctctctgggctttgt
caccgaatgactaaccctccacaactgccaacaacaacaatacagcttccaaccgtttta
aattacagtgcttatggggttctttatgctgtcctgtgttttctctttatttattcaagg
caatttgctgtaaaagttcatgaaataaatgaaactcagaagacatttgcgtga
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