Amphiprion ocellaris (clown anemonefish): 111586531
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Entry
111586531 CDS
T06018
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111586531 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111586531 (vps8)
Membrane trafficking [BR:
aoce04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111586531 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Clathrin
TPR_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
zf-RING_Vps41
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING_2
ANAPC4_WD40
zf-C3HC4
zf-C3H2C3
Beta-prop_EML_2
PHD_4
Beta-prop_HPS5
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
111586531
NCBI-ProteinID:
XP_023152060
Ensembl:
ENSAOCG00000005373
LinkDB
All DBs
Position
16:21216877..21288181
Genome browser
AA seq
1405 aa
AA seq
DB search
MSQSPDTRSLLSASSQLNLMEVDSIDDKEFDIPQVDTPPTLESILSELEDEEEPFVLEDT
CVLNTDNMDAHSCDTSSLASSDSGDPAHLKRKRRTVDLNATVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITVSGVIAVGTSHGLALVFDTNQALRLCLGTKTTGAEFGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDDPTLAVCNDSGGSV
FELAFRRVMGMRSCDSRCLFSGSKGEVCCIEPLHAPPDFRDHPITHYSLLAMASLTKILV
IGLKPTLKVWMTFPYSKSDPSSVPQLAWQFVPVQKMVNPILAFCKGDTVHFLLVKKEETG
TIHVIKQRQLHLSCDIISLSWINSRTLVLVDSHEKLQVVDRPSQEVLETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIVYLGTKSAHIMTLRNWRERIDCWL
KQEHFVEALSLAWSFHEGTAKAVVGLFGDPLKRKGVVSDKMVEILFQFTEYALKKCPEQG
KIQVMEQHFQDVVPVLVEYCLLLQRADLLFNQLYAQLVENMVAKGVFLESLESYIVADRL
GHLTPPIMRDLLAHYHDNGMMDSLERCIVHLDVTSLDIQQVVQVCWENQLYDAMIYVFNS
GMNDYITPMEKLFAVIVPTLKEGRSLTDEDVVMGNKLLVYISCCLAGRAYPIGDIPEDLV
VQVKNQVFEFLIRLHSADSSSEEEVFPFIHTLLHFDTREFLNVLAMTFEDFKNDKQALEY
QQRIVDILLKVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCPDD
DSRHTERQQVLLELLQVGGVVQFNEERLLTLAEKAKFYQICEFLYEKKHLYDKIIDCYLQ
DPLRKWEIFSYIHNLLSMPGYSPEEKQTVKNKARQHMQELITLDPSKSADLVLFHFVDEV
QQIISELQDDQILFKFLSCLLEPREGPHSESLLPLERDLNELLLDLLCRFAPHQLLSFLH
TSQHYRLEEAIQITEKYHCNDARAYLLQKKGDVQGAFAVLLETLNQKLCLLTAESDGGVE
GENRGQNKDEEDSESTLTRVKDSLNDIIVFCHQSCQNLDQQQREVLWFPLLDAMMASQKQ
VKGHNAKHTCDVLKELTMEVLTCMSSFISLPAIIQQILQDPVYGRGKLAEIQGLILGMLD
TFNYEQTLLETTTSLLNHDLHWSLAHLRAAVTRGLHPRQDYCNICLQHYKRRQDSAEEII
VFSCGHLYHFQCLQQKNCGWGSAAEVQQRWRCYKCSSSHGGRSGISTEPKRSRSASLAQT
HVTSVHHDGGAVANRKKVFVEATLDLQQEQSWDQIRSLYQGPSRLSILSELSHGHSYEKT
GSLSTALSGTESFQLKLSPPPLFEE
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtccccggacacccgcagcctgctctcagcctcctcccagctcaacctgatg
gaagtggactcgatcgacgataaggagtttgacattccccaagtggatacccctcccaca
ctggagagcatccttagtgagttggaggatgaggaggaaccatttgtgttggaagacacc
tgtgtgctaaacacagacaacatggatgcccactcctgtgacacctcctctctggccagc
tctgacagtggagacccagcacacctcaaacgaaagaggaggacagtggatctgaatgca
accgttcatgggtctgtccttcgacacagcctgctcaagggcatctctgcacaaatcgtg
tctgctgctgacaaagtcgacgctggactgccaacggctataacggtgtcaggtgtgatt
gctgtgggaacatctcatggtctggctctggtctttgacaccaaccaggctctgcggctc
tgtctgggtaccaagacaactggagcagagtttggagctgtctctgcccttagcatcaac
catgattgctcacgacttctctgcgggtttgccaaaggacagattacgatgtgggaccta
gccaatgggaagcttctgagaactatcactgatgcccaccctccagggaccgctatactg
catgtgaagttcacagatgatccaactcttgcagtgtgcaatgacagtggaggatctgtt
ttcgagctggctttcaggagagtgatggggatgcggtcatgtgattctcgatgtctcttt
agtggttctaaaggggaggtctgttgtattgaacctttgcatgctcctccagacttcaga
gaccatcccatcacacactactctctgctggctatggcatctctcactaagattttggtc
atcggactgaagcccacccttaaagtgtggatgacttttccctacagcaagtctgatcca
tccagtgtacctcagctggcctggcagtttgttcctgttcagaagatggtcaatccaatc
ctggctttttgcaaaggagatacagtccacttcctcttggtaaagaaggaggaaacaggg
accatccatgtcatcaaacaaagacaactccacctcagctgtgacatcattagcctaagc
tggattaacagtcgtacactggtcctggtggacagccatgaaaagctgcaggttgtggac
cggcccagtcaggaggttttggagactctggacttggagcaggtgcaactagtctataac
agccgacatttcaaatcgctggccaccggagggaatgtctcccaggctctggctttagtt
ggagaaaaggcctgttaccagtctgtctcgagctacgcaggacagatcgtctatttgggc
acaaagtctgctcacatcatgactctaaggaactggagagagcgtattgactgctggctg
aagcaggagcattttgttgaggctctttctttggcctggtccttccacgaaggaactgct
aaagctgtcgttggcctgtttggcgatccactgaaaaggaaaggagtggtcagtgataag
atggtagagatccttttccagttcacagagtatgctttgaagaagtgtccagaacaaggc
aagatccaagtcatggagcaacatttccaggatgttgttcctgtcctggtggaatactgc
ttgctgctacagagggctgacttactgttcaaccagttgtatgctcagctggtggagaac
atggttgctaaaggtgtcttcctggagtcactggagtcgtacattgttgctgaccgcctt
ggtcacctcaccccacccattatgagggacctcctggctcattaccatgacaatggcatg
atggacagcctggagaggtgcattgtgcatctagatgtcaccagcctggacatacaacag
gtggttcaagtgtgttgggagaaccagctctatgatgcaatgatctacgttttcaacagc
ggtatgaatgactacattactccaatggagaaactgtttgcagtcattgtcccaacactg
aaggaagggaggagcttaactgatgaagatgttgtgatgggaaataaactgctggtgtac
ataagctgctgtcttgcaggaagggcatatccaataggagacatccctgaagaccttgta
gttcaagtcaagaaccaggtgtttgaattcctgatccgtctccattcagctgactcctcc
tcagaggaggaagttttcccatttattcatacactcctccactttgatacccgggaattt
ctcaatgtccttgccatgacatttgaagactttaagaatgacaagcaggcccttgagtac
cagcagaggatagtggacatcttacttaaggttatggtggacaacccagactttactcct
tcccaggtcggtggactcttcacctttctggctcgccagttggccaaaccagacaacaca
ctttttgtgaacaggaagctctttgatcaggttctggagttcttgtgttgcccagatgat
gactcccggcatactgaaaggcagcaggttctgctggagctgctgcaagtcgggggtgtg
gtccagtttaatgaagaaaggctgctcactttggcagagaaggccaagttctaccaaatc
tgtgaatttctttatgagaagaaacatctgtatgacaagataattgattgctacctacaa
gaccccctcagaaagtgggagatctttagctatatccacaatctgctgtccatgcccggc
tacagccctgaggagaaacaaacagtcaagaacaaagcacggcaacatatgcaggagcta
ataacccttgaccccagcaaatcagcagaccttgtgctgtttcattttgtggatgaggtg
cagcaaatcatctctgagctacaggatgaccagatacttttcaaattcctcagctgcctc
ttggaaccaagggaaggccctcattcagagtccctcctacctctggaacgcgacctcaat
gagctgctgttggacttactgtgccgttttgctcctcaccagcttctgagcttcctccac
acctcccagcactacaggctggaagaagccatacaaataacagagaagtaccactgcaat
gatgctagagcctatctactgcaaaagaaaggagatgttcaaggagcgtttgctgtcttg
ttagagacactgaaccaaaaactatgtctcctcactgctgagagtgacggaggagttgaa
ggagaaaatagaggtcagaataaggacgaggaagacagtgaatcaacgctaacaagagta
aaggattcactgaacgacattattgtcttctgtcatcaaagttgccagaacctggaccag
caacaaagagaggttctgtggtttccacttctggatgccatgatggcttctcagaaacaa
gtgaaaggccacaatgccaaacacacctgtgacgtgctaaaggagctgacgatggaggtt
ctcacctgtatgagcagctttatttctttgcctgccataattcagcaaatattgcaggac
cctgtctatggcagagggaagttggcagagattcagggcctcattctggggatgctggac
acttttaactatgaacagacattacttgaaacaaccaccagtctgttgaaccacgacctc
cactggtccctggctcacctacgtgctgctgtcacaaggggactccacccacgtcaagac
tactgtaacatctgcctccagcactacaaaaggaggcaagattcagcagaggagatcatt
gtgttcagctgtggccacctgtaccactttcagtgcctgcagcagaagaactgtgggtgg
ggatctgctgcagaggtccagcagcggtggaggtgctacaagtgttcctctagccatgga
ggaaggagtggaatttccactgaaccaaagagaagtcgaagcgcatctcttgcacagacg
catgttacatcagtgcatcatgacggaggagcagtggctaacaggaagaaggtgtttgtt
gaggcaacgttggaccttcagcaggagcagtcctgggatcagatacgttctttataccaa
ggaccatccaggttgtctatcctttcagaactctcccatggccacagctatgagaaaaca
ggctctctaagcacagccctatcaggaacagagagtttccagcttaaactctctcctccc
cctctttttgaagaatag
DBGET
integrated database retrieval system
