Amphiprion ocellaris (clown anemonefish): 111586780
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Entry
111586780 CDS
T06018
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111586780 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111586780 (cnot3b)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111586780 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111586780 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
111586780
NCBI-ProteinID:
XP_054873855
Ensembl:
ENSAOCG00000018385
UniProt:
A0AAQ5XPE5
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Position
15:complement(1764105..1809322)
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AA seq
920 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRYHI
RMLETILRMLDNDSVQVEAIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEEIPHLATS
PPGHSHLEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSPVK
NGNPSSSLSSSSSSSSSSSVSGLTSSSLVSMATIAGGGSGGSGGNSHHGNSGVLHSNTSA
GSYSNATQQPPHPSAQQQAKNSVSSTSMAPISNPSTSTNSHPASSASSPPNASTQGLFTS
NSQPQGPLGPTPTSNSLGLSLGLSLGKGGLSGSITTSPMSGGLGLSGMPASLSTMAGLLS
GSTPAPYAQAAASGAVGSGLPGSLGGVSTTTTNSALGSIGSITVGGPTSSTGGLLGASPG
VGSIGSGILGLGSGQSGVQGSSLMSLSPVGGLAPGSGVGVIGSNGGGTGSAGSVGVVGGN
SLLSVRPPSQQKQNGSTSYSAVVADSTTDSALNSASQSQSSQPSSLTSTANQPKDTGPSL
LGSMSLSSSSPSPASYSEAKPVSGGSLLNGPLSYSQSSDSIKPQEPLSSLKSMAERAALS
SGIEGDVPSLHLTPDIFPSSTTAPSGPPSAPQPSLSEVSIPPSLGVCPLGPVPLSKDQLY
QQAMEEAAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDTVEFYQRLSTETLFF
IFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWG
QRKKEGFTFEYRYLEDRDLQ
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggtgaaatagatcgatgtctgaaaaaagtagcggag
ggagtggaacagttcgaagacatctggcaaaagcttcacaatgcagccaatgcaaaccag
aaggagaaatatgaagcagacctcaagaaagagattaaaaagcttcagcgtcttcgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaaaaggcagctagtagagaac
cgcaaactcatagaaacgcaaatggagcggttcaagatcgtggagagagaaacgaagacg
aaagcgtactcgaaagaaggcctagggctcgcccagaaggtggacccggcccagagggag
aaggaggaggttggcacgtggctaacaaacacaatagacacgttgaatatgcaggtggac
cagttcgagagcgaagtggagtctctgtcagtccagacgaggaaaaagaaaggagacaag
gagaagcaggaccggatcgaagagctcaagaagttcatcgagaagcaccggtaccacatc
cggatgctggaaacgatactcaggatgctggacaacgactcggtgcaagtcgaagccatc
aggaaaatcaaggatgacgtggagtactacctggactcatcgcaggacccagactttgag
gagaatgagttcctgtacgacgacctggatctggaggaaattcctcatctcgccacctcc
ccgccgggtcactcgcacttggaggatgagatcttccagcactccagcagcacacccacc
tccacgacctcgtcctcgcccattcccccgtcgcctgcaacttgcactacagagaactca
gaagatgacaagaagaggggacgttcaacagacagtgaagttagtcagtcgcctgtgaag
aacggaaacccctcctcctcgttatcctcttcttcctcctcctcctcctcttcctccgtc
tcgggactaacctcatcctcactggtctctatggcgaccatcgccgggggaggaagcggc
ggctccgggggcaacagtcatcacggcaactcgggggttctccactccaacacctccgcc
ggcagctacagcaacgccacccagcagccgccgcacccgtcagcacagcagcaggccaaa
aactccgtcagctccacctccatggcgcccatctccaaccccagcacctccaccaacagc
caccccgcctcctccgcctcctccccacccaatgccagcacacaggggctcttcacttca
aactcccagcctcagggccccctggggcccacgccgacctccaacagcctgggcctcagc
ctgggcctgtctctggggaaaggcggcctgtccggctccatcaccaccagccccatgtcc
gggggcctcggcctgtcggggatgccggcgtccctgagcaccatggcgggccttctgtcc
ggctccaccccggcgccctacgctcaggcggccgcctcaggtgcggtaggctccggctta
ccgggctctctgggcggcgtcagcaccacgaccaccaacagcgccttgggctccatcggc
agcatcacggtcggcgggccgacgtcctccacgggaggtctgctgggggcgtcgccgggg
gtgggcagcatcgggtctgggattctgggtctgggctccggtcagtcgggggtgcagggg
tcttccctgatgtcgctgagcccagtaggaggcttagctccaggcagcggagtcggggtt
atcgggagcaacggaggcggcaccggatcagcggggagcgtgggagtcgtgggaggaaac
tcgttgctgtcggtgcgaccgccgagccaacagaagcagaacggtagcactagttacagt
gctgtagtagcagacagcacaacagactccgccctcaacagtgccagccaatcacaaagc
agccaaccttcatctttgacctccacagccaatcagcctaaggacactggtcccagtcta
ctgggctctatgagtctgtcgtccagctccccgtcgccggcctcctacagcgaggccaaa
ccggtgagcggcggcagcctgctgaacgggccgctgtcgtactctcagtcctccgacagc
ataaagccgcaggagcctctgagcagcctgaagtccatggccgagcgagcagcactcagc
tcagggatcgagggagacgtgccctccctgcacctcaccccagacatcttccccagcagc
actacggccccctcgggtcccccctcagcacctcagccctcactgtcggaggtcagcatc
cccccttcgttgggggtctgtcctctggggcccgtccccctgtccaaagaccagctctac
caacaggccatggaggaggcggcgtggacgcacatgcctcacccgtccgactccgagagg
atcaggcagtacctgatgaggaacccctgccccaccctgcctttccaccaccaggtgcca
ccaccccactccgacactgtagagttctaccagaggctttccacggaaaccctcttcttc
atcttttactacctggagggcactaaggcccagtatctggcagccaaagccctgaagaag
cagtcgtggaggttccacaccaagtacatgatgtggttccagcggcacgaagagcccaag
accatcaccgatgagtttgagcagggaacctacatctacttcgactatgagaaatggggc
cagcggaagaaggagggtttcacgtttgagtaccggtacctagaagaccgagacctccag
tga
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