Amphiprion ocellaris (clown anemonefish): 111586875
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Entry
111586875 CDS
T06018
Symbol
parpbp
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111586875 (parpbp)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111586875 (parpbp)
TLS (translesion DNA synthesis) factors
Other TLS factors
111586875 (parpbp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GreA_GreB_N
Motif
Other DBs
NCBI-GeneID:
111586875
NCBI-ProteinID:
XP_054862630
Ensembl:
ENSAOCG00000014578
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All DBs
Position
21:3298700..3323475
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AA seq
585 aa
AA seq
DB search
MEALGDRLKLMVQTFRRECHRVLQSERTTVLGADGMLMVLQLAMAEVNKKQHGGEFKVAL
SDVLMAWKHLLLDKLHLPPPGSARSENYDLILEAYESFLKRSNAVDLVDIFSMYKQLGLE
PEEPVSPTQLFEFLSGNMEIPELPSVPSTPSSRLDPCSSQVKMAVRRVFCSYLSLLVNSK
NDMALVLTLDVPSRSLGRQAFTDIKHAAHDSNTSLFLAVTSFVRAIQLGGKGYAPSESDP
LRKHVKGLSDFVQFLDNLEEILGEIPDPSACGARLVAAIRAALVKGRSSGEAAYVAAEEA
TKELKERIHQLHQIQTQVAHGSGTRISPARPKAHAVNHATAYGGRDTVKVLMALLDEEAV
TPPCPNKADLLSEDQPVLSGADGTCFLMMFRSPEVSTGCSPEPLRNRVQSRLDPLKPKAR
DRVIRSQFACTYKDEELPLNRVLDFPSSSQLPTCVHPAPKAKTTTAAGESSSDGDDTTTV
FAATPATECLSEAQRGAALQQRSRNAQNRGAGPGNRKKTGIQMQSKGNKRKQLESDQRGG
SENEPPQKKQPSRASVKMPGKNVCKAPSKKKLIAGQGKLTSFFRV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaggccttaggagaccgtctcaaactgatggtacagaccttcaggagggaatgccac
agggttttacagtcggagagaaccaccgtccttggagctgacggcatgctgatggtgctg
cagctcgccatggcagaagtgaataaaaagcagcacggcggagagttcaaagtggctctg
agcgacgtcctgatggcctggaagcacttattgttagacaaacttcacctgccgcccccc
ggctctgcacgctcggagaactatgatctcatcctggaggcttacgagtccttcctgaaa
cgctccaacgccgtggacctggttgatatcttctccatgtacaaacaactgggactggag
cccgaggagcccgtgagcccgacccagctgtttgagttcctatcaggcaacatggagatc
ccagagctgccctcagtgccatcaacgccgtccagtagactggatccctgcagctcccag
gtgaaaatggcagtgagaagggttttctgctcctatctgagtttgcttgtgaactccaag
aacgacatggccctggtgctaaccctggacgtccccagtcgctctctgggccgacaggcg
tttaccgacatcaagcacgctgctcacgacagcaacacctctctcttcttggctgtgaca
tctttcgttagggccatccagctcggagggaaaggctacgctccatccgagtctgaccca
ctgaggaaacatgtcaaaggcttgtcggactttgtccagtttctagacaacctggaggaa
atactcggggagattcctgacccaagtgcatgtggagccaggctggtggcggccatcagg
gcggcgctggtgaagggacgcagcagcggagaggcggcgtacgtcgcagctgaagaggcc
accaaggagctgaaggaaaggattcaccagctccaccagatacagacacaggttgcacat
ggaagtgggaccaggataagtcctgccaggccaaaagctcatgcggtcaatcacgccacc
gcgtacggaggtcgggacaccgtcaaggtgctgatggcactgctggacgaagaagccgtg
acccctccgtgtcccaacaaggcagacctgctgtccgaggaccagcctgtcctcagtgga
gccgatggaacctgcttcctcatgatgttcagatcccccgaagtgtctactggatgttct
ccagaacccctaaggaaccgagtccagagccgactagaccctctcaaacccaaggccagg
gacagagtcatcagatcccagtttgcgtgcacctacaaggatgaagaactgcccctcaac
cgtgtgctggacttccccagctccagccagcttcctacctgtgtgcacccagcacccaaa
gccaaaaccaccacagctgccggtgagtccagctctgatggggacgacacaaccacagtc
tttgcagccactcctgccactgagtgtctgagtgaggcacagcggggggctgctctccag
caaagaagcagaaatgcccaaaacagaggtgcaggccctggtaatagaaagaaaactggc
attcagatgcaaagcaaggggaacaagaggaagcagctggaatctgaccaacgtggcgga
tcagagaacgagcctccacagaagaaacagccgagccgtgcgtcagttaaaatgcctggc
aaaaacgtctgcaaggccccgagtaagaagaagctaatagctggacagggaaagctaacc
agcttcttcagagtctaa
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