KEGG   Amphiprion ocellaris (clown anemonefish): 111587130
Entry
111587130         CDS       T06018                                 
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082  ATP-dependent chromatin remodeling
aoce03083  Polycomb repressive complex
aoce04110  Cell cycle
aoce04330  Notch signaling pathway
aoce04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111587130
   03083 Polycomb repressive complex
    111587130
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    111587130
   04350 TGF-beta signaling pathway
    111587130
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    111587130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aoce03036]
    111587130
Enzymes [BR:aoce01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111587130
Chromosome and associated proteins [BR:aoce03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     111587130
   HDAC complexes
    Sin3A-HDAC complex
     111587130
    BRAF-HDAC complex
     111587130
    REST complex
     111587130
    SHIP complex
     111587130
    MiDAC complex
     111587130
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     111587130
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111587130
  Chromatin remodeling factors
   NuRD complex
    111587130
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 111587130
NCBI-ProteinID: XP_023152720
Ensembl: ENSAOCG00000008362
LinkDB
Position
12:complement(23550992..23567149)
AA seq 490 aa
MAYTTAGGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTHEY
MDKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEDTVDEDTEDPDKRLSIRATDKRIACDE
EFSDSEDEGEGGRRNAANHKKGAKRPRVDEDKKEGEEKKADIKEEEKTKDSSTEKTDSKS
SVKTEQTSSA
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggcttacacgacagcgggtgggaccaagaagaaggtctgctactactacgacggagat
gtcggaaattactactatggacaagggcatccgatgaaacctcaccgcatccggatgact
cacaacctgcttctcaactatggactgtacaggaaaatggagatctatagaccacacaaa
gccactgcagaggagatgacaaaataccacagcgacgactacatcaagttcctcagatcc
atacgaccagacaacatgtccgagttcagcaagcagatgcagcggttcaacgttggggag
gactgtcctgtgtttgatggcttgtttgagttctgccaactgtccgctggaggctctgct
gctggttctgtgaaactcaaccgacagcagactgacatcgcagtgaactgggcaggagga
ctccaccacgcaaagaagtctgaagcctctgggttttgttacgtcaacgacattgtgctg
gccatcctggagctactcaagtaccaccagagggtgctgtacattgacatagacatccac
catggagatggagtggaggaggccttctacaccacagacagagtcatgactgtgtccttc
cataaatatggggagtacttccctggaactggagacctcagggatattggtgctggaaaa
ggcaaatattatgctgtcaacttcccgctgcgggatggcattgatgatgagtcatatgag
caaatcttcaagcctgtaatggccaaagtgatggagatgtaccagcccagcgctgtggtt
cttcagtgcggcgcagactctctctcaggagatcgactcggctgttttaacctcaccatc
cgcgggcatgccaaatgtgtggagtacatgaagtccttcaacctcccgctgctcatgctg
ggtgggggaggatacaccatccgtaacgtggcccgctgctggacctatgagacagctgtg
gctctggacacagacatccctgatgagctgccatacaacgactacttcgagtacttcggt
ccggacttcaagctgcacatcagtccctccaacatgaccaaccagaacactcacgagtac
atggacaagatcaagcagcggctgtttgagaaccttcgaatgcttcctcatgctcctgga
gttcagatgcaggccatcccagaggacgccatcccagaagacacggtggacgaggacacg
gaggatcctgacaaacgcttgtccattcgcgccacagataagaggatagcctgtgatgag
gagttctccgactccgaggacgagggggagggaggccggaggaacgcagccaatcacaag
aagggagccaagagacccagagtggacgaggacaagaaggaaggcgaggagaagaaagcc
gatataaaagaagaagagaagacgaaggacagcagcactgagaagactgactcaaaaagc
agtgtgaagactgagcagaccagcagtgcctga

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