Amphiprion ocellaris (clown anemonefish): 111587237
Help
Entry
111587237 CDS
T06018
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111587237 (taf1b)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
111587237 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Importin_rep_4
Motif
Other DBs
NCBI-GeneID:
111587237
NCBI-ProteinID:
XP_023152896
Ensembl:
ENSAOCG00000022209
LinkDB
All DBs
Position
12:complement(8360976..8372218)
Genome browser
AA seq
599 aa
AA seq
DB search
MDDEYTAGYREPCSQCSAVDWGITDECHFYCRSCHNVIERTRDVEDTGFVQGGSNKISSI
RKGSKKKLERGHIWMVCEGFQFILRNQANALLRLGVSPQFKDDVLCPLWRLFLQRSRLAY
TSNPVKSSKFRVQDVNSYSDSAAESSIMSASATDGESNPPSVADSNAENASDYSGSMDVS
SYLSARLRRKRSPLSMMKTLALIHLALVWSREALTLSDLLRLVNEGHVPYVNAYEQLPEE
MKVVGKDALLFRVESIPSHRVVHKEAQALVLFLQLPAFPPVTCETLLHPELLSLRYLTDT
NLPDELHLWVCRLMEQAGMADQTLHTFDPHSCPVLPRYDVQTAALIIVTMKFLFGLDDQT
EWNLSNEVGNQSDSGDMFNLRRWYRLMQTALMRAQQRRRQDIARKQWKAKKLIFPKNNGA
KRTMMKKKRIAEQVQLCFEKLSSRPAGVQEVSPSSFRFCWGDEEGSDGPSLHHMKLDGVV
SQKHNLLTPSNSTYWHPGLKKCDRRRCPSSHYSDMEPTLPRSFVWLLQLFSFLLDVKPSD
LYEEVLKVERQVIGTKTHCDVSSRKKKTRTSARTKSSPRTLERTCLTGGESGKTVSDSS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaatatacggctgggtacagggagccctgttctcagtgctcagcggtggac
tggggcattacagacgagtgtcatttctactgcaggtcctgccacaacgtcatcgagaga
accagagatgtggaggacacgggttttgttcaaggagggtccaacaagatctcctccatc
aggaaaggaagcaagaagaagctcgaacgtggtcatatatggatggtgtgtgaaggtttc
cagttcatcctgaggaaccaggccaacgctctgctcagactgggagtcagtccacagttt
aaggacgacgtgttgtgtccactgtggagactcttcctgcagaggagtcgactggcctac
acctctaacccagtgaagagctccaagttcagagtgcaagatgtgaactcgtattcagac
agtgcagccgagtcgtccatcatgtccgccagtgcgacagacggagagtcgaacccgccg
agcgtcgccgactctaatgcagagaacgccagtgattactcaggttcgatggatgtctcc
agctacctctcggctaggctgaggcggaaacgcagtccgttgagtatgatgaaaactctg
gctctgatccacctggctctggtctggagccgcgaagctctgactctaagcgacctgctc
aggctggttaacgaaggccacgtcccgtatgtgaacgcctacgaacaactgcctgaagag
atgaaggtggtcggaaaagacgctctcctctttagagttgagagcatcccatctcaccgg
gttgtgcataaggaggctcaggctctggttctgttcctgcagcttcctgcttttcctcca
gtcacttgtgagactctgctgcacccagagctgctcagcctgcggtatctgaccgacacc
aacctgcccgatgagctccacctctgggtctgcagactaatggaacaagccggtatggca
gatcaaacactccacacatttgacccgcattcctgtcctgtgctgcctcggtacgacgtc
cagaccgccgccctcatcatcgtcaccatgaagttcctcttcggcctagacgaccaaact
gagtggaatttatccaatgaagttgggaaccaaagcgactcaggtgatatgtttaacctg
aggaggtggtacagattaatgcagactgctttgatgcgagctcagcagaggagacggcag
gatattgccaggaaacagtggaaggcaaagaaactaattttcccgaagaataatggggct
aaacgtacgatgatgaaaaagaaaagaatagcggagcaggtgcagctgtgtttcgagaag
ctgtcctccaggccggctggagtccaggaagttagtccgtccagcttcaggttctgctgg
ggggacgaggagggatcagacggtcccagtctgcatcacatgaagctggatggagtcgtg
agccagaaacacaacctcctgactccctccaactccacgtactggcatccagggctcaag
aaatgtgaccgccggcggtgccccagcagtcattactcagatatggagccaacgctgcca
cgctccttcgtctggctgctgcagctcttctccttcctactcgacgtgaagccatccgac
ctatacgaggaggtgttgaaggtggagagacaagtcatcggtaccaaaacgcactgcgac
gtatcctcgaggaagaagaaaaccaggaccagcgcccggaccaaatcatcacccaggact
ttagaaagaacttgtttaactggaggagaaagtggaaaaactgtcagtgactccagctaa
DBGET
integrated database retrieval system
