Amphiprion ocellaris (clown anemonefish): 111587260
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Entry
111587260 CDS
T06018
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
111587260 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111587260 (kcnma1a)
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
111587260 (kcnma1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
111587260
NCBI-ProteinID:
XP_054874945
Ensembl:
ENSAOCG00000020765
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Position
16:complement(9112451..9270479)
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AA seq
1353 aa
AA seq
DB search
MLAEADGTVPHGSDSSMRTSNINNNINPDSSIVISKMEDVVIPFSSDVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYMWTVCCHCNIKNKEAQKVNNPANNQPADRALKGPDE
KEEAPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLK
LLLIAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRLMDEVRPSIQNRSVKTTGCNSTSITSNAFLPNALHPNQDLLVNPGT
HIPLVNNRKGSLLPMGPGPRADPSQLRLSISGPGDVAARSLAESRLNRASSLPVKYRYHP
SNAMLLSHSRHFEDEHPSTLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIENMD
MNVKRYDSTGMFHWCPSKDIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMP
LRASNFHYHELKPIVFVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMC
VILSANQNNIEDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSP
VHGFVRQASVTTGSNIPIITELAKPGKLLPLVPLSQEKKSGTNIQMITELVNDSNVQFLD
QDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEAL
LAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCF
GIYRLRDAHISTPTQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHS
SHSSSKKSSSVHSIPPSNRQNRSSKTREARDKQNATRMNRMGQEKKWFTDEPENAYPRNI
QIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggcagatggcacggttccccatggaagcgacagctctatgaggacaagc
aatatcaataataatataaatccggactcttcaatcgtaatatccaagatggaagacgtt
gtcatcccgttctcgtccgacgtgccatgcgacaataatggacagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgttttttgggggtctcttcatcatcctgctatggaga
accctcaaatatatgtggactgtttgctgccactgcaacattaaaaacaaggaggctcag
aaggtgaacaacccagctaacaatcagccagcagacagggcattaaagggtcctgatgag
aaggaggaggcaccagccagcgaagtgggatggatgacttcagtcaaagactgggccggt
gtcatgatctccgctcagacgctcaccggcagagttctggtggtgttagtctttgctctc
agcattggggcccttggaatatactttatagactcttcagatcctatagaatcctgccag
aacttctacaaagatttcacgttacagatcgatatggccttcaacgtcttcttccttctt
tactttggcctgcggtttatagcagccaatgacaagctgtggttctggctggaggtcaac
tccgtggtcgacttcttcactgttcctcctgtgtttgtgtctgtctacttaaacagaagc
tggcttggtttaagattcctgagagcactaagattgatacagttctcagaaattttacaa
ttcttgaatatattgaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctcacagctgctggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttccaaaattcccagtcgttatcctattgggaatgtgtctacttgctgatg
gtgactatgtctacagtgggctacggggatgtctatgcaaaaaccaccttggggcgcctg
tttatggtcttcttcatccttggtggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcatattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgtcactttacccaagtagagttctaccag
ggatctgttctcaaccctcacgatctggcccgagtgaagatcgagtcagcagatgcctgc
ttaatccttgccaacaaatactgtgcagatcctgatgcggaagacgcctccaacatcatg
agggtcatttctatcaagaactaccatcccaagatccgaataatcacacagatgctacaa
tatcacaataaggcccatctgctgaacattccaagctggaactggaaggaaggtgacgat
gctatctgtctggcggagctgaaggcaggcttcattgcccagagttgtctggcccagggc
ctgtcgaccatgctagccaacctcttctccatgaggtccttcattgagattgaggaggac
acatggcagaagtattaccttgaaggagtggctaatgagatgtacacagagtatttgtcc
agtgcctttgtaggcctctccttccccactgtctgcgagctgtgttacgtgaagctgaag
ctgttgcttattgccattgagtacaagtctgagcagagagagagcagaagccgaaagcgc
atcctcatcaacccgggcaaccatgtcaagatgcaggagggaacactgggattctttatc
gctagtgatgccaaagaagtaaagagagcatttttctactgcaaagcttgtcatgatgac
atcacagaccccaaacggatcaagaagtgtggctgcaaacgactaatggatgaagttaga
ccatctattcaaaaccgatcagttaaaaccaccggctgcaactcaacctccatcacctca
aatgcattccttcccaacgccctgcaccccaaccaggacctcctggtcaatccgggcaca
cacatccctcttgttaataaccgtaaaggaagcctgctccccatggggccggggcccagg
gctgacccctcgcaattgcgcctcagtatctcaggtccaggagatgtggcggccagatcc
ctggctgagagtcgactgaaccgggccagcagtctgccggtgaaataccgctaccacccc
agtaatgccatgctgctcagtcacagtaggcactttgaagacgagcatccatcaactctc
tcgcccaaaaaaaagcagcgcaatggagggatgcgaaactcacccaactgctcgcccaaa
atgatgagtcggcacgaccctcttctaattcctggaaatgaacaaattgaaaacatggac
atgaacgtgaagaggtatgactcgacagggatgtttcactggtgcccttcaaaagacatc
gaaaaagtcatcctgacccggagtgaagcctccatgacagtactgagcggccatgtagtg
gtctgtatatttggggatgtcacgtccgctttagtggggctgcgaaacttggtgatgcct
ttaagagccagcaacttccattaccacgagctaaagcctatagtttttgtgggctcgctg
gattacctgcggagagagtgggaaactttacacaacttccccaaggtctccatcttaccc
ggtacaccattaagtcgggcagatttaagggctgtcaacatcaacctctgcgacatgtgc
gtaatactgtcagccaatcagaacaatatcgaagatgcctcactgcaggataaggaatgc
atcttggcatcactcaacatcaaatctatgcagtttgatgacagcattggagtcttacag
gctaattcccaaggtttcacgcctcctggaatggacaggtcatctccagacagcagtcca
gtacatggctttgtgcgtcaggcttccgtcaccaccggatccaacatccccatcatcacc
gaactagctaaacctggcaaactactgccattagttccactcagtcaggaaaaaaaaagt
ggaaccaacatacaaatgataacagagctggtgaacgactcaaacgttcagttcctggac
caagatgatgatgacgacccagacacagagctgtacctcactcagcccttcgcctgcggc
acggccttcgctgtcagtgtactcgactccctgatgagtgcgacatacttcaatgacaat
atccttacgctgattcggacgctggtcacgggaggagccacaccagagctggaggcgctg
ttggctgaggagaacgctctcagaggaggctacagcacaccgcagacgctggccaacaga
gacaggtgtcgcgtcgcccagctagccctctacgacgggccatttgctgacttgggggat
ggcggctgctatggggatttgttctgtaaagcgttgaagacgtacaacatgctgtgtttc
ggaatctacagattaagagacgctcacatcagtacaccgacccagtgcacaaaacgatat
gtgatcacaaaccccccatacgagtttgagctggtgcccacagacctgatcttctgcctc
atgcagttcgaccacaacgctggccagtcccggacaagcttatcccactcttcccactcc
tcccattcctccagcaaaaagagctcctccgtgcactccatccccccctccaaccggcag
aaccgcagcagcaagacccgggaggcccgcgacaaacagaatgcaacaaggatgaataga
atgggccaagaaaagaaatggtttacagatgaaccagaaaatgcctacccacggaacatt
cagatcaagcccatgagcactcacatggccaaccaagtcaaccaatacaaatccactagt
agtctgattccaccaatcagagaagtcgaagatgaatgctga
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