Amphiprion ocellaris (clown anemonefish): 111587348
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Entry
111587348 CDS
T06018
Symbol
snupn
Name
(RefSeq) snurportin-1 isoform X1
KO
K13151
snurportin-1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111587348 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111587348 (snupn)
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
111587348 (snupn)
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Gene cluster
GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
CENP-B_dimeris
DNA_ligase_A_M
Motif
Other DBs
NCBI-GeneID:
111587348
NCBI-ProteinID:
XP_023153034
Ensembl:
ENSAOCG00000018096
LinkDB
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Position
3:20462233..20472296
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AA seq
374 aa
AA seq
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MDDLTQALSASFAVSKEPNSTAGPHPRLAQYKSKYSVLEQSERRRRFLDLQKSKRLNYVN
HARRLADGDWAGADSDGEEDMEKQEEGEREQDGNAEEEGMEIERRKLPKHYANQLMLSEW
LVDVPSELDTDWLMVVSPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KADYTILDCIYSEVDRTYYILDVMCWRGHPVYDCPTEFRFYWLQSKVQETDGLSETAKRN
PFRFVSLQSTECTVELIQKALAAEYSFSVDGLLFYHRQTHYTPGSTPLVGWLRPYMVTDI
LGIEVPVGPLTTKPEYASHQLQQILEHKKPSSEVRPANSSGGYELEYLSTPSRDSEDTRN
FLNQKPIKEAHMEV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccttacccaagcactctcggccagctttgctgtgtccaaggagcccaacagt
actgccggcccacacccacggctggctcagtacaagagcaagtacagtgtgctggagcag
agtgagcgacgacggcgatttcttgacctgcagaaaagtaaaaggttaaattatgtcaac
cacgcacggcgtttggctgatggagactgggcaggggcagacagcgacggggaggaagac
atggagaagcaggaggagggggaacgagagcaagatggcaacgcagaagaggaggggatg
gagattgagaggaggaagctgcctaaacattacgcaaaccagctcatgctgtcagagtgg
ctggtggatgtaccatcagaactggacactgattggctgatggtggtctctcctgtgggg
aaacggtcactcatcgttgcctccaagggttccactgcagcatacaccaaaagcggctat
tgtgtgaaccgtttcccttccctgctgcctggtgggaacagacacaactctgccatggga
aaagcagactacacaatcctggactgcatttacagtgaggtggacagaacgtactacatc
ctggacgtcatgtgctggagaggccacccagtctacgactgcccaactgagttccgtttc
tactggctccaatccaaagtccaggagacggacggcctatcagagactgctaaacgtaac
cctttccggtttgtgagtctccaaagtacagaatgcacagtggaattgattcaaaaggcc
ctggcagcagagtacagcttcagcgtggatggtctcctcttttaccaccggcagacccac
tacacccctggcagcacccctctggttggctggcttcgcccctacatggtcactgacatc
ctgggcatagaggttcctgtgggacccctcaccaccaagcctgagtacgccagccaccag
ctgcagcagatcctagaacacaaaaaaccttcaagtgaagtccgcccggccaacagcagc
ggcggctacgagctagagtacctgtccaccccgagccgggacagtgaggacactcggaac
tttttaaatcagaaaccaataaaagaagcacacatggaggtttga
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