Amphiprion ocellaris (clown anemonefish): 111587351
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Entry
111587351 CDS
T06018
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111587351 (lingo1a)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
111587351 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
LRR_9
Ig_2
LRR_Zer-1
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
111587351
NCBI-ProteinID:
XP_023153040
Ensembl:
ENSAOCG00000033599
UniProt:
A0AAQ5ZJE8
LinkDB
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Position
3:complement(19884063..20022870)
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AA seq
615 aa
AA seq
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MAAGEATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTVPE
GIPAETKLLDLSKNRIRTINPDEFATFPNLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLRHLNINVIRDYSFKRLYRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITTKTIGRLSVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLSHLHIHSYSPDWPHQPNKTFAFISNQPTETGANGTRAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SSTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggggaagcgactgggcacagctacctggtggcttgctggcagcccattctg
atcctgatgctcggcaccgtgctgtctggctccaccacaggctgtccatcccgttgtgag
tgcaatgttcaagagcgctctgtgatgtgccaccgcaagaagctcatgacagttcctgag
ggcatccctgcagaaacaaaactgctggacctcagcaagaaccgcattagaaccattaac
ccagatgagtttgccacttttcccaacctggagcacctggaactcagtgaaaacaccatc
tccactattgaacccggagcgttcaacaacctttatggcttgcggacattgggattacgt
agtaacaagctgaagctgatccagcttggtgtcttcactggtctgagcaatctcacacag
ctggacataagtgagaacaagatcgtcatcctgctggactacatgttccaggatttgtac
aacctccggtctttagaggtgggcgataatgacctggttttcatctcccaccgggctttt
catggcctaagtagccttgaacacctgagtcttgagaagtgcaacttgtcctctgtgcca
acagaggcttttacccacctgcacagtttgatcactctcaggctgcgccacctgaatatc
aatgtcatacgggattactcttttaagcggctctatcggctgaaagtgttggaaatagcc
aattggccatatttggatacgatgactccaaattgcttgtatggattaaatctcacctcc
ctgaccattgcaaatgccaacctgaccacaattccctatgtagccctgcggcacttggtt
tatttgcgctttcttaatctgtcatacaaccctatccataccattgaaggaaataagctc
cacgatcttctgcgtttgcaggaatttcaccttgtcggaggcagactggcaatgattgag
ccctactctttccgtggtctaaactacctgaaaattctaaatgtctctggaaactctctt
agcaccctagaggagtctgctttccattcagttggcaacctagaaacccttgccttgtat
gataatcccctggcctgtgactgccgactgttgtgggttttccgaaggcgctggagactg
aacttcaacaggcagcagcccacctgtgcctcccctgaatttgtgcaaggcaaagagttc
aaagacttcccggatgttctgcagcccaactactttacgtgtcgcaagtctaggattagg
gatcgcaaaccccagcagaaatttgttgatgagggagccattgttcattttgcttgccaa
gcagatggagatcctgctccagtgataatgtggctatctccacagaaaaagtttatcacc
accaagacgattggaaggctctcagtgctgccagacggtacccttgaggtgcgctacgcc
cagattcaagataatggtacatatgtgtgcatagctagcaatgcaggcggaaacgacacc
tctctttctcacctacacattcatagctactcgcctgactggccacaccagcccaacaag
acttttgccttcatatccaaccagcccacagaaactggtgctaacggtacaagagccaat
gtccctttcccgtttgatataaagactctgatcattgcgaccacaatgggcttcatatct
tttcttggtgttgtcctgttttgcctggtactgctgttcctttggagcagaggtaaaggc
aatactaagcacaacattgagatcgagtatgtgccacggaaatcggacgctggcatgagc
agcagcacagtggatgctcctcgcaagtttaacatgaaaatgatttaa
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