Amphiprion ocellaris (clown anemonefish): 111587428
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Entry
111587428 CDS
T06018
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111587428 (ppfia4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111587428 (ppfia4)
Membrane trafficking [BR:
aoce04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111587428 (ppfia4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
111587428
NCBI-ProteinID:
XP_023153144
Ensembl:
ENSAOCG00000013765
LinkDB
All DBs
Position
5:complement(23201934..23262477)
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AA seq
1193 aa
AA seq
DB search
MMCEVMPTISEGDSAGPPRGTGGVPNGSDQEANFEQLMVNMLDERDKLLESLRETQETLI
QSQTKLQGALHERDVLQRQINAALPQEFATLTKELNICREQLLEKEEEISELKAERNNTR
LLLEHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERL
RVALERVATLEGQLASTTQELNMVRQRKDGDSVERGDGSKPTWKRLPNGSIDAHDDGSRV
SELQELLDRTNKELAQSREHSATLNARVAELEAELANARRELSRSEELSIKQQREQRERE
DMEERITTLEKRYLAAQRETTHIHDLNDKLENELATKDSLHRQSEEKVRQLQEMLEMAEQ
RLAQTMRKAETLPEVEAELAQRVAALSKAEERHGNVEERLRQLESQLEEKNQELGRARQR
EKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNSLIQDLENCQKQLEEFHHT
RERLIGEIDKLRNEIDHLKRRSGAFGDGTHPRSHLGSSSDLRFSMVEGQDGHYSTTVIRR
AQKGRLSALRDDPNKVCAVFEQDYPSLRGSVSHLLGSDIEAESDLDDDVSSALLSPSGQS
DAQTLALMLQEQLDAINEEIRMIQVERESADLRSDEIESRVNSGSMDGLNVTLRPRALPT
SATAQSLASSSSPPTSGHSTPKHHGRNTSHHLGIMTLPSDLRKHRRKVASPVEVDKATIK
CETSPPSSPRSLRLETNFAQFTGSLEDGRGKQKKGIKSSIGRLFGKKEKGRMDQTVGRDG
QSLPALSDFEMGIGDTMTLGKLGTQAERDRRMKKKHELLEDARKKGLPFAQWDGPTVVSW
LELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTS
PSAPLTSRTSSGNVWVTHEEMENLASSSKAENEEGSWAQTLAYGDMNHEWIGNEWLPSLG
LPQYRSYFMECLVDARMLDHLTKKDLRSHLKMVDSFHRASLQYGIMCLKRLNYDRKDLER
RREDSQHDMKDVLVWTNEQVIHWIQSIGLREYSGNLLESGVHGALVALDETFDYSSLALI
LQIPMQNTQARQVLEREFNNVLALGTDRRLEETGDDKSFRRSPSWRKRFRSREGVAGLGM
MAGSMETLPAGFRMPSMSMPPSMNLAPKKHLQPEAPSPAPPRLDPSAVRTYSC
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgaccatcagcgaaggagattcagccggtcctcccagaggc
accggcggcgtcccgaacggctcggaccaggaggccaacttcgagcagctgatggtcaac
atgctggacgagagggacaagctgctggagtccctcagggagactcaggagaccctcatt
cagtctcagactaagctgcagggggcgctgcacgagagggacgtgctccagcggcagatc
aacgccgcgctgcctcaggagtttgccaccctgacgaaggagctgaacatatgcagggag
cagctgctggagaaagaagaggaaatatctgagctgaaggctgaaaggaacaacaccagg
ctgctgttggagcacctggagtgtctggtgtctcgtcacgaacgcagtctgaggatgaca
gtggtaaagagacaggcacccccaccatctggagtctccagcgaggtggaggtcctcaaa
gctctgaagtccctgtttgaacaccacaaggccctggatgaaaaggtgcgtgagaggctt
cgggtggctctggagagggtggccaccttagagggacagctagcgtctaccacacaagag
ttgaacatggtgagacagaggaaggacggtgactcagtggagcgaggagatggatccaaa
cctacatggaagagactacccaacggctctatagacgcccacgatgacggcagccgggtg
tctgagcttcaggagctgctggatcggaccaataaggagctcgctcagagccgcgagcac
tctgccactctaaacgcccgggtggccgagctggaggccgagctggcgaatgcacgccga
gaactgagccgcagcgaggagctgtcaatcaaacaacaaagagaacagagagagagagaa
gatatggaggagaggataacaacattagagaaacgctacctggctgctcagcgggagacc
acacacatccacgacctcaacgataaactggagaatgaactggccaccaaggactccctg
catcgacagagcgaggaaaaggtgcgccagctgcaggagatgctggagatggcagagcag
aggctggctcagaccatgaggaaggctgagacactgccagaggtggaggctgaactggca
cagagagtggcggcgctctccaaggccgaggagcgccatggcaacgtggaggagcgcctc
agacagctggagtcacaactggaggagaagaaccaagagctaggaagggcccgtcaaagg
gagaaaatgaacgaggagcacaacaagcgtttgtctgacactgtggatcgtctgctcacc
gagtccaatgaaagactgcagctccatctgaaggaacgcatggctgccctggaggacaag
aactcccttattcaggaccttgagaactgccagaaacagcttgaagaattccaccacacc
agggagcggctgattggagagattgataagctgagaaatgaaatcgaccatttgaagcgc
cgcagtggggcttttggagatggaactcaccctcggtctcacttgggtagctccagcgac
cttcgcttctctatggtggagggccaggacggccactacagcacaactgtgatcaggcga
gcacagaagggtagactgtcagcgctacgagatgatccaaacaaggtgtgtgcggtgttc
gaacaggactatccatctctgcgtgggagcgtcagccacctcctcggcagcgacatcgag
gccgagtcagacctggatgatgacgttagctcagccctgctttcccccagcggccaatca
gatgctcagactcttgcgctcatgctgcaagagcaacttgatgctatcaatgaggagata
aggatgatccaggtagagagagaatcggcagacctgcgctctgacgagatcgagtctcgt
gtgaacagcggcagcatggatggactcaacgtgacacttcgaccccgagccttgcccacc
tccgccactgcccagtccctggcctcgtcctcttcaccgcccaccagcggccactccacg
cctaaacatcacggacgcaacaccagccaccacctcggcatcatgactctgccaagtgac
ttgaggaagcaccgaaggaaagtagcatctccagttgaagtggacaaagcgaccatcaag
tgtgagacgtcaccaccctcctctcctcgcagtttacggctggaaaccaatttcgcccaa
ttcactggcagtctggaggatggacgaggaaagcagaagaaaggaatcaagtcatctatt
ggccgattgtttgggaagaaggaaaagggtcgaatggaccagactgttggcagggatgga
cagtctctgccagccttatcagactttgagatgggcatcggggacactatgactctggga
aaactgggcacacaggctgagagggaccgaagaatgaagaaaaaacacgaacttctggaa
gatgcaagaaaaaaaggtctgccttttgctcagtgggatgggcctactgttgtctcatgg
ctagagctgtgggtgggtatgccagcctggtatgtggcagcctgtcgtgccaatgtgaag
agtggagccatcatgtcagctctctcagacactgagatccagagggagatcggcatcagc
aaccctctgcaccgactcaaactccggctggccatccaggagatggtctccctcaccagc
ccatcggcaccactcacatccagaacgtcctccggaaatgtgtgggtgactcatgaagag
atggagaacctggcttcctccagcaaagcggagaatgaggagggcagctgggcacagacc
ttggcgtatggagacatgaatcacgagtggatagggaacgaatggctgcccagcctcggc
ctgcctcagtaccgctcctacttcatggagtgtctagtggatgctcgcatgttggaccat
ctgaccaagaaggacctgaggagccacctgaagatggtggacagcttccacagggctagt
ctgcagtacgggattatgtgcttgaagagactcaattatgacagaaaagacctggagcgt
cggagagaggacagccaacacgacatgaaagatgttctggtttggaccaatgagcaggtg
attcactggatccagtccattggtctaagggaatatagcggcaacctgttagagagcggc
gttcatggagcgctcgtcgctctggatgaaaccttcgactacagcagcttagcgctcatc
ctgcagatccctatgcagaacacacaggcccggcaggttctggagagggagtttaacaac
gtgttagctttgggaactgaccgccgactagaggagactggtgatgacaagtcttttcga
cgctctccatcgtggcgcaagcggtttcgttcccgtgagggagtggcgggtttggggatg
atggcgggctccatggaaacgctgcctgctggcttccgcatgccctccatgtccatgccg
ccctccatgaatctggcacctaagaaacacctccagcctgaagctccttccccagcgcct
ccgagactcgacccctcagccgtgcggacctattcatgttaa
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