Amphiprion ocellaris (clown anemonefish): 111587448
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Entry
111587448 CDS
T06018
Name
(RefSeq) transcription factor SOX-5-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111587448
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111587448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cob_adeno_trans
Exonuc_VII_L
AAA_23
Motif
Other DBs
NCBI-GeneID:
111587448
NCBI-ProteinID:
XP_023153177
Ensembl:
ENSAOCG00000002370
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MLSVPATLMSSKRPASPYGGTDGEVTMATSRQRVEDEESEGLGGVIHLPLASYCGKVSPR
SPPNRNLDSPPNMEQDGTKGSSLSPYPQHNATSPGKEEGGGSGRPCSDGGSAGGTLGTPE
RRKGSLADVVDTLKQRKMEELIKNEPEEAPSIERLLSKDWKDKLLAMGSGHIGEIKGTPD
SLAEKERQLMGMIGQLSSLREQLLAAHEEQKKLAASQMEKQRQQMELAKQQQDQIARQQQ
QLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAAQQGFLMPPGFNYKPGCS
DPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGAKQHGGSLPPQANLGTH
SPPTNTHPQSDKGRSSPPPKTKDSEGAQPLNLSAKPKASESKSPNSPPTSPQVPAAAAAT
KLGPAGSMKHSVAPSSIGGPPTRVSSI
NT seq
1342 nt
NT seq
+upstream
nt +downstream
nt
atgctctcggttcctgcgactctgatgtcttccaagcgaccagcctctccatatgggggg
acagatggagaggtaaccatggcaaccagcagacagcgagtggaggatgaggagagcgaa
ggactgggtggtgtcatccatctccccctggcctcctactgcggcaaggtgtcccctcgc
tcgccccccaaccgcaacttggacagcccccccaacatggagcaggatggcactaagggg
agctcactgagtccttacccccagcacaatgctacctcaccgggcaaagaggagggtgga
ggcagcgggcggccctgcagcgacggaggctcggccggcggcaccctgggaaccccggag
agacgcaagggcagcctggccgacgtggtggacacactgaagcagcgcaagatggaggag
ctgatcaaaaacgagccagaagaggcccccagcattgagaggctgttgtcaaaggactgg
aaggataaacttttggccatgggctcagggcacattggagaaattaaaggtaccccagac
agcctggcggagaaagagcgccagctcatgggcatgattggccagttgagcagcctgagg
gagcagctcctggcggcccacgaggagcagaagaagctggccgcctcgcagatggagaag
cagaggcagcagatggagctggccaagcagcagcaggaccagattgcccggcaacagcag
cagcttctgcagcagcaacacaaaatcaacctcctgcagcaacaaatccagcaggtccag
ggccagctcccgccgctgatgattcccgtctttcctccagaccagcggactctggcggcg
gctgcagcccagcagggcttcctaatgccccctggcttcaactacaagcctggctgcagt
gacccctaccctctccagctcatccccacaacgatggccgccgctgcagccgccacacca
ggcctgggacccctccagctccagcagttgtatgccgcccagctggcagccatgcaggtc
tccccaggggccaagcagcacggaggcagcctcccccctcaggccaacctgggcacacac
tccccacccaccaacacacacccacagagcgacaagggccgcagctccccgccacccaag
accaaggacagtgagggtgcacagccactgaacctgtcggccaagcctaaggcatccgag
agcaagtcacccaactcccccccaacttccccacaggtccctgctgctgctgccgccacc
aagctgggccctgccggctccatgaagcacagcgtcgccccctccagcattggaggaccg
ccgaccagagtcagctcgatag
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