Amphiprion ocellaris (clown anemonefish): 111587501
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Entry
111587501 CDS
T06018
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111587501
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111587501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111587501
NCBI-ProteinID:
XP_023153245
Ensembl:
ENSAOCG00000026662
UniProt:
A0AAQ5ZI50
LinkDB
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Position
23:18309407..18314922
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AA seq
307 aa
AA seq
DB search
MYSMMEHELKPTGQPPSHHASQGMSPITGSMTGTIGSNGNSHPNSKTSCSPGSDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPLLKKDAQVGKYPLSAGNLLAAAAQGQAGSPRMESYGWGPSGGYA
GMQGEALGYTQQLHRYDLSALQYPPAMSAAQTYMNGGNSYSPMSYSSSPQQPSSVTMSMV
KAEPVSHSPPTGTPNHHRGALQGDLRDMISMYIPGPGGDATDPSTAQRGYTSVQQHYLTG
TVPLTHI
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagctgaagccgaccggccagcccccttcgcatcatgcc
tcccagggaatgtcaccgataaccggcagcatgaccgggactattggcagcaatggaaac
tctcacccgaactccaaaacgtcttgttcacccgggagtgaccccatggataaagtcaag
cgacccatgaacgccttcatggtctggtcaaggggtcagaggcgcaagatggctcaggag
aacccaaaaatgcacaactctgagatcagcaagcggctgggagctgagtggaagctgctg
accgacgtggagaagcggcctttcatcgacgaggccaagcggctccgagcggtccacatg
aaggagtaccccgattacaagtacaagccacgccgcaagacgaagcccctgctgaagaag
gacgctcaggtggggaagtatccgctgtcagccgggaacctgctggcggcagcagcgcag
ggtcaggccggtagtccgaggatggagagctacggctggggccccagtggagggtacgcc
ggcatgcagggcgaggcgctcggctacacgcagcagctgcaccgctacgacctgtcagcg
ctccagtacccgccggcaatgtccgcagcacagacctacatgaacggaggcaactcatac
agcccgatgtcatacagcagcagtccacagcagcccagctccgtcaccatgtccatggtg
aaagcagaaccagtatcccactcgcctccaacggggacaccaaaccaccaccgcggagct
ttgcagggtgacctcagggacatgatcagcatgtacattcccggaccaggaggagatgcc
acggacccatcgacagcacagagaggctataccagcgtccagcagcactacctcactggg
actgttccactcacacacatctag
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integrated database retrieval system
