Amphiprion ocellaris (clown anemonefish): 111587630
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Entry
111587630 CDS
T06018
Name
(RefSeq) retinoic acid receptor gamma-like isoform X2
KO
K08529
retinoic acid receptor gamma
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111587630
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aoce03310
]
111587630
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111587630
Nuclear receptors [BR:
aoce03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
111587630
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111587630
NCBI-ProteinID:
XP_023153427
Ensembl:
ENSAOCG00000025070
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Position
5:complement(24687065..24725519)
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AA seq
490 aa
AA seq
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MATNREHQVRHMTGFPRAMYPFTFNSMRSHSPFDLLASSHLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPENYELSG
ELEELVNKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALKIY
TRRRRPNKPHMFPRMLMKVTDLRGISTKGAERAITLKTEIPGPMPPLIREMLENPEAFED
SSDSGDSAAAAPPAIQAIKQEEKSTYESEEEEEEDDYWDEEKERGADSDGEPWGETSAGA
AAAQKKSVTQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacagagagcaccaagtgcgtcacatgacaggcttccctcgtgccatgtac
ccgttcacctttaactccatgcggagccactcccccttcgacctgctggccagtagtcac
ctttttggccgatttggagcagatcttcccaaagagatggctgccctgtcggtggagacc
cagagcaccagctcagaggagatggtgcccagctctccttctcctcctccaccccctcgg
gtctacaagccgtgctttgtgtgccaggacaagtcatctggttatcactatggagtgagc
tcctgtgagggctgcaagggatttttccggcgcagcatccaaaagaatatggtgtacacc
tgccaccgagacaagaactgccagatcaacaaagtgacccgcaaccgctgccagtactgt
cggctgcagaagtgctttgaggttggaatgtccaaagaagcggtgcgcaatgacaggaac
aaaaagaagaaggatgtgaaggaggaggtggtgctgccagagaactatgagcttagtgga
gaactggaggagctggttaacaaagtcagcaaagcgcaccaagagaccttcccgtctctg
tgccaactaggaaaatacaccacaaattcaagtgctgaccacagagtacagctggacttg
ggcctgtgggataagttcagtgagctctccactaagtgcattataaagattgtggagttt
gccaagcggctaccaggcttcactacgctcaccatcgctgaccagatcaccctcctcaaa
tctgcatgtctggacatcctgatgctgaggatatgcacccgctacacgccagaacaggac
acaatgaccttctcagatggcctgactcttaacaggacccagatgcacaatgctggcttt
ggccccctcacagacctggtgtttgccttcgccggtcagctgctgcctttggagatggac
gatacagagacggggctcctcagtgccatttgtctcatctgtggagatcgaatggacttg
gaagagccggagaaagtagacaagctgcaggaaccgctgctagaggcgctgaagatctac
actcgccgcagacgcccaaacaagcctcacatgtttccccgcatgctgatgaaagtcaca
gaccttcgaggaatcagcactaaaggtgcagaaagagccatcacattaaagacggagatc
ccaggccctatgcctccgctgatccgggagatgctggagaaccccgaggccttcgaggac
agcagcgactccggtgacagcgctgcggctgctccccctgccattcaagccatcaagcaa
gaagagaagtccacgtacgagtcggaggaggaggaggaagaggacgactactgggacgag
gagaaagagcgaggggcggacagtgatggagagccgtggggggagacatcagcaggggcg
gcggctgctcaaaagaaaagcgtgacgcagtga
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