Amphiprion ocellaris (clown anemonefish): 111587693
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Entry
111587693 CDS
T06018
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111587693 (trpa1b)
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111587693 (trpa1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
ANK_LRRK2
TBCA
PKD_channel
Motif
Other DBs
NCBI-GeneID:
111587693
NCBI-ProteinID:
XP_023153538
Ensembl:
ENSAOCG00000003095
UniProt:
A0AAQ5XM70
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Position
22:14372814..14398061
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AA seq
1118 aa
AA seq
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MNFSRDVARQTSCYTYVIEDDDPALAKVNVFELAERGDLALLDNLVRKSPEVLSEKDECG
ASPLHHAAAGGHVTLIQFIIAVIDSQEVNSCDEDGNVALHWAVEKNKAESCRALMDLGAD
PNILNKALMSPLHLAVSCGHNNLVGLLLSYNITDCNLQGDLENTPLILACSINNCEALSI
LIKHGAKLCKRNKLGHYPIHAAAFAGAKKAMEVILKEGEEFGHVCVSHINYLDKSNSSPL
HLAVRGGNMETIRLCLACGAKVDQQQNDKSTPLHLACTQGAIEVVKLMLSSVDQVEDIIN
LTDGALQTPLHRATIFDHTELAEYLISLGADLNSIDCKGTSPLLLATSCGAWKTVALLLS
KGADVTVKDRCGCNFLHLAILQPKGLKNLPEEVLQHNSVKALLSCEDNEGCTPLHYACRL
GIHDSVKNMLGLSGQVGLACKSKDKKSALHFAAQYGRINTCQRLLETITDSRLLNEGDER
GLTPLHLASKEGHSKVVQLLLRKGALFHSDYKGWTCLHHAASEGYTRTMDILLSANLKLL
DKTDEDGNTALHFAARGGHVAAVRLLLIRGAEIILSKNHTSFLHEALQNAKKDVVNAVID
SDRCSEALRMFTPGSIQRCPIVDMIEFLPETYKHLLDRCVRESDDDHNSPDYHIEYDFAW
LQAPLIAKKMSDKSMKFEPLAALNAMVKYNRIELLNHPLCKKYLAMKWVAYGSTAHVLNM
FLYLLGLMPLTHLIVTLRPSMNITATGKHDITMVPISFIEQNLFLSFCMVMVLIMNIYSI
VKEVVQITQQRWSYFRDYSNQCDWSSAIFSLLFIIPLMLNSEGSLHWQAGAIAVLNSWVG
FLLYLQRFEGVGIYVVMFGEIMRTLFRVVMLFFYLMLAFSLAFHALMLNQREFSSVPLSI
MQTFVMMVGELNYQNNFLDANLNHELPFGPLTYFIFVSFVLLMPILLVNLMIGLAVGDIA
EVQRNAALKRIAMQIDLHTALEDKLPYWFMKRVDKPSVIVYPNRKCSRHLIKQILFGEEE
TNEVWNRLQSKSQGCTVIETELKKQKQRMKEVSNMLEKQHCLLKLIIQKMEITSEADEYD
GPVTIRGTVWPTLSHVKPRGQSTSRWVPLMKALESKRK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaactttagcagggatgtggcccggcaaaccagttgttatacttatgtcatagaggat
gatgatccagccctggccaaagtcaatgtatttgagttggctgagaggggtgacctggct
ctcctggacaacctcgtgaggaagagcccagaggtcctgagtgagaaagatgaatgtgga
gccagtccccttcatcatgccgccgcagggggccacgtcaccctcatccaattcatcatc
gctgtcatcgactcacaggaggtgaacagctgtgatgaggatggcaacgtggccctacac
tgggcagtggagaagaacaaggcagagagctgcagggctcttatggacctgggggctgac
cccaacatcctcaacaaggccctcatgtctcctctgcatctggctgtcagctgcggacac
aacaacctggtggggctgctgttatcctacaacattacagactgcaatctacagggagac
cttgagaacaccccgctgattcttgcctgctccattaataactgcgaggctctcagcatt
ttgataaagcatggagcgaagctttgcaaacgaaacaagctcggccattaccccatacac
gctgcagccttcgcaggcgcaaaaaaagccatggaagtgattctgaaggaaggagaggag
ttcggccacgtatgtgtgtcccacatcaactatttagacaagtccaacagcagccccctc
catctggctgtacgtggcgggaatatggagacaatccgtctctgccttgcatgtggggca
aaagttgaccagcaacagaatgacaagtctacaccgcttcatttggcctgcacccagggt
gctattgaggtagtcaaactgatgctctcctctgttgaccaagtagaagacatcatcaac
ctaactgatggggcgcttcagacacctctacacagggctacaatatttgaccacacagag
ctggcggagtacctaatttctttgggtgctgacctaaacagcattgattgtaaaggaacc
tcccccttgctgctggctaccagctgcggcgcatggaaaactgtggctctgctgctgtca
aaaggggcagatgtaactgtgaaagacagatgcggctgtaacttccttcacctggcgatt
ctgcagcccaagggcctgaaaaatcttccagaagaagtgctgcagcataacagtgtaaag
gcgttgctgagctgtgaggataacgagggctgcaccccgctccactacgcttgcagactg
ggcatccatgactcagtgaagaacatgctgggcctttcggggcaggtcggcctcgcgtgc
aagtccaaggacaagaagtctgccctgcatttcgctgctcagtatgggcgcatcaatacc
tgtcaacgattactggagaccatcacagactctcgcctgctaaatgaaggagatgagcgg
ggcctgacaccactccatttggcctcaaaagagggccacagcaaggtggtgcagctgctg
ctacgcaaaggagccctctttcacagtgattacaagggctggacttgcctgcaccatgct
gcatctgaaggatacacacggactatggacatcctactgtcagccaatctcaaactactg
gataaaaccgatgaagatgggaacaccgcattgcactttgctgcaagaggaggacatgtg
gctgcagtccggctcttactaattcggggggcagaaatcatcctaagcaagaatcacact
tcattcctccatgaagctctgcaaaacgcaaaaaaagacgtggtgaatgctgtgattgac
agtgacagatgttctgaggctttaagaatgttcacacccggcagcatccagcgatgtccc
attgtagacatgattgagtttttgcccgagacctacaagcatctattggaccgctgtgtg
agggaatctgatgacgaccacaacagccctgactaccacattgaatatgacttcgcatgg
ctccaggctccccttatagcaaagaagatgtctgacaagagcatgaagtttgagccacta
gctgccctcaatgcaatggtgaagtacaaccgcatcgagctcctcaaccacccactctgc
aaaaagtatctggcaatgaagtgggttgcgtatgggagcacggctcatgtactcaacatg
ttcttgtacctgttagggctaatgcccttaactcacctgattgtgaccttaaggccctct
atgaacattactgccacgggcaagcacgatatcaccatggtgcccatatctttcatagag
caaaacctgttcctgagcttctgcatggtgatggtcttgattatgaacatctactcaata
gtgaaggaagtggtgcagataacacagcagcgctggagttacttcagggattactccaac
cagtgtgactggagctcagccattttctcccttctgttcataatccctctcatgctcaat
tcagagggctcattacactggcaagcaggcgcaatagcagttttaaactcttgggttgga
tttctcctttatctccagaggtttgaaggagttggcatctatgttgtgatgtttggggag
atcatgaggacactgttccgtgttgttatgctgttcttctacctgatgttagcattcagt
ttggcattccatgccctaatgctcaatcagagagagttcagcagtgtgccactctccata
atgcaaacctttgtgatgatggttggggaactgaactaccagaataacttcctggatgca
aatctgaaccatgagcttccatttggtcctctgacatactttatctttgtgagctttgtt
ctgctcatgccaatcctgctggtgaacctgatgattggtttagcagttggagacattgct
gaagttcaaagaaatgctgccctaaaacgaatagccatgcagattgacctccacactgct
ctggaagacaagcttccgtactggttcatgaaacgcgtagacaaaccctctgtcatcgtc
taccccaaccgcaaatgctccaggcaccttataaagcaaatactcttcggcgaagaggaa
acaaatgaagtctggaatcgtctgcagtccaaatcacagggctgcactgtgatagagact
gagctcaaaaagcagaagcaaagaatgaaggaggtgtccaacatgctggagaagcagcac
tgcctcctgaagctcatcatccagaagatggagatcacgtctgaggccgacgagtacgac
ggccccgtgactatcaggggcaccgtgtggcccactctgagtcacgtgaaaccaagagga
cagagtacgtctcgctgggtgccactgatgaaggccctcgagtccaaacgaaagtga
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