Amphiprion ocellaris (clown anemonefish): 111587716
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Entry
111587716 CDS
T06018
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111587716 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111587716 (dhx36)
03012 Translation factors [BR:
aoce03012
]
111587716 (dhx36)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111587716 (dhx36)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111587716 (dhx36)
Translation factors [BR:
aoce03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111587716 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NPHP3_N
NB-ARC
Motif
Other DBs
NCBI-GeneID:
111587716
NCBI-ProteinID:
XP_023153570
Ensembl:
ENSAOCG00000000046
LinkDB
All DBs
Position
7:3176554..3202668
Genome browser
AA seq
1060 aa
AA seq
DB search
MSYGYSGGGGRRGRRGGRGYRDGSRERWDRGGGGGSRGHSSDFDQDRDGGGQRTRPPPHL
KGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDQPGLDRDRRDSK
ASTSDNWQTAANKSGHCYFDGDMPEEEKVKTEEEEEEVSSGQKKSQCYFSAAAAKDEPPD
TWDEDDQEEEEKEKPIRKDKDLEYLFQEVVRDRSLDNDLKRDLQSKSSDTKYREMLKFRE
KLPSYSKKEELVELINSNRVLVVSGETGCGKTTQVTQFILDDYINRGMGSLCRVVCTQPR
RISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSVLYCTTGIILQWLRSDPLL
SSVSHLVLDEIHERNLQSDVLLIIVKDLLKQRDDLKIILMSATLNAEKFSKYFDNCPMIH
IPGLTFPVEEFLLEDIIEMTRYRPQNQDRRPSWKRGFWQGRHSRPEKEEKEAEYKESWPC
YARTLKGRYSDNTIEALETLDGDDKIDLELILALIRYIVLNEEEGAILVFLPGWDNISSL
NDLLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVV
YVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRASLLD
AYQLPEIMRTPLEELCLQIKILKLGSIGRFLEKALDPPTEKAVNLAIKNLTDLNALDRAE
NLTALGFHLARLPVEPHIGKLILFGALLGCLHPVLTIAASLSFKDPFFIPLGKEKMADMR
RKVLSRNSKSDHLTIVNAFQGWEEAKQRGARYEREYCWDNFLSANTLQMLHNMKGQFAEH
LMHAGFVSSRDPKDPKSNVNSDNEKLIKAVIVAGLYPKVAMIRPSHSKKRPGVKVYTQAD
GKVCIHPKSVNAEETEFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKDED
QDTIAVDQWIVFRSPARIAHLVKSLKNELDSLLQEKIRNPAPVDWQNRQSKDCAVITAII
DLITTQEKPTGGSKGYGRTWASAPRGQHIYFNDDDDDDDD
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggatatagcggtggaggaggaagaaggggaagaagaggaggtcgtgggtac
agagatggcagcagagagagatgggacagaggaggtggaggaggttcgagaggacacagc
tctgactttgaccaggaccgagacggaggtggccaaaggacccgtcctcctccacacttg
aagggtcgtgagatcggtctgtggtacgcaagatacggagccgtgaggaggaaacaggct
gaccggagatcgcgtgcagtggtccagatggatgaggctcgagagcagcacattaccaag
ctgcttaactcggtccagaatgaccagcctggtctggacagagacaggagggatagtaaa
gcctctacgtctgacaactggcagacagctgccaataaaagtggtcattgttactttgat
ggggatatgcctgaagaggagaaagtcaaaactgaggaagaagaagaagaagttagttca
ggccagaagaaatcacaatgttacttctctgcagcagcagctaaagatgagcctccggac
acgtgggatgaagatgatcaggaagaagaggagaaagagaaaccgataaggaaagacaag
gatttggagtacttatttcaggaagtagttagagataggtcactggataatgacttgaag
agagatctgcagagcaagtcctcagatacaaagtacagagaaatgctgaaattcagggaa
aaactaccatcctacagcaaaaaagaggagctcgtcgagctgatcaactctaaccgtgtt
ctagtggtgagtggggagaccgggtgtggaaagaccactcaagtcactcagttcatcctc
gatgactatatcaacagaggcatgggttcattatgccgtgtggtctgcacacagcctcgt
cgcatcagtgctatctcggtagcagagcgtgtagcagcagagagagcagaaagtgtagga
aatggaaattcttgtggttaccaaatccgcctgcagagccggttaccacggagacaaggt
tcagtcctgtactgtacaacaggcattattcttcagtggcttcgctcagatccattgttg
tccagtgtgagtcacctggtgttggatgaaatccatgagaggaacctgcagtcagatgtt
ttgctcatcattgtaaaggacttactcaaacaacgggatgacctcaagatcatcctcatg
agtgccacgctcaacgcagagaagttttccaaatattttgacaactgtccaatgatccac
atccctggtttgacgttcccagtggaggaattcctgcttgaggatataatagaaatgacc
aggtatcgcccccagaatcaggaccgtcgcccttcatggaagagaggcttttggcaggga
cgccactccagacctgagaaggaggagaaagaggctgaatacaaggagagctggccttgt
tatgcacgcacactgaagggcagatactctgacaacaccatcgaggcactggagacgtta
gacggtgatgacaaaattgatctggagctgatcctggcactgatccgttatattgtgctc
aatgaagaggaaggagcaatcttggtcttcctgcctggctgggacaacatcagcagtctc
aatgacctgcttatggctcagcagatgtttagatcagaccggtttgttatcatccctttg
cactccctcatgccaaccgttaatcagacacaggtattcaaaaggcctcctcctggagtt
cgaaagattgtgattgctaccaatatagctgagaccagcatcaccatagatgacgttgtt
tatgtgatagatggaggcaagattaaggagaccaacttcgacaccaacaacaacatcagc
accatgacagccgagtgggttagcttggccaatgccaaacagaggaaaggacgcgctggc
agagtgtgtccagggaagtgctatcatctgtacaatggtctcagggccagcctgctcgat
gcctatcaattacctgaaattatgaggacaccgctggaggagctctgcttgcagatcaag
attctgaagctcgggtctataggtcgattcctggagaaagccttggaccctcccactgaa
aaggctgtcaacctagccatcaagaacctcacagacctgaacgccctggaccgagcagag
aatctgacagcactgggtttccacctggctcgtctgcctgtggagcctcacattggtaaa
ctcatcctgtttggagctctgttgggctgcctccaccccgtgctcaccatcgctgcttca
ctcagcttcaaagaccctttcttcatacccctgggcaaagagaagatggcagacatgagg
agaaaggtcctgtctagaaactctaagagtgaccacctcactattgttaatgccttccag
ggctgggaggaagctaagcagcgaggtgccaggtatgagagggagtactgctgggacaac
ttcctatctgccaacacactccagatgctacacaacatgaagggccagtttgctgaacat
ctcatgcatgcaggtttcgtcagcagcagggatcccaaagaccccaaatccaacgtcaac
tcggacaatgagaaattaatcaaggcggtgatagtcgccggtctgtacccgaaagtggcc
atgatcagaccatctcacagcaaaaagaggccaggggttaaggtttacacccaggctgat
ggaaaagtgtgtatccacccaaaatctgtcaacgctgaggagacggagttcaactatacg
tggcttatttaccacctcaagatgagaacgagcagtatcttcctgtatgattgtaccgag
gtgtccccattctcactgctgttctttggaggagacatcaccatccagaaggacgaagac
caggacaccatcgcagtggaccagtggatcgtcttcagatctccagctcgcatcgctcac
cttgttaagagtttaaagaacgagctggattcgctgctgcaggagaaaatccgtaatcca
gctcctgtggactggcagaaccgccagtctaaagactgtgctgtgatcacagccatcata
gacctcatcactacccaggagaagcccacaggcggcagtaagggctatggcaggacgtgg
gcgtctgccccaagaggacaacacatttacttcaatgacgatgatgatgatgatgatgat
tag
DBGET
integrated database retrieval system
