Amphiprion ocellaris (clown anemonefish): 111588052
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Entry
111588052 CDS
T06018
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111588052 (sh3tc2)
Membrane trafficking [BR:
aoce04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
111588052 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
SH3_2
TPR_1
TPR_2
SH3_1
SH3_9
TPR_MalT
TPR_7
TPR_NPHP3
TPR_10
SNAP
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
111588052
NCBI-ProteinID:
XP_023153945
Ensembl:
ENSAOCG00000015347
LinkDB
All DBs
Position
13:33764792..33784043
Genome browser
AA seq
1578 aa
AA seq
DB search
MALISGSCRLLGQMASCCCRPLLNSSCCGPLIKVCLSSFTDISPAELDALWREPPYTLNE
HFSGNDNMTQGACEEEDGPLVESGEGGVESDSYWKKKEAFLRGSNVSLGEKFSSEIVLLF
TGRRRASVDPDRALQEALRTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDSFVLTFKTV
EEIWKFSTYLSLGYVARCLENFLCDQSVWLDPELLSDLEINVTVDEEHLATLYLGLLLQE
GSFFAKALFTRSEQDEDDEEQLSFKKNDLLMVKDTGQDNMWEGTMLSTGNHGLVPVNAMQ
PLPYPFYQWFLRKYPSHAGCSLTDKEPFEHSIVTGSCVVTVDYSPGGPDELQLSQGDTVE
IQGLLLRGLDIFIGRHASTGHTGFVHKAHVKPLNTLPLDEQLVFLTEEEKASLGQVNPCG
SEPIDNSLLERLFSSEISSVYRLDRLDDSDFMYIRSRPKHDHKILTSTRQSVMSERSGGT
PPYQSSPRPSFSQSSPRVSVYHSHNPLPREGERLSFTLDDTFRELDEFQEDPPLFLEENS
WDGEESELSDPTLTLLNQEHFQEEFLPLYDLQYSFLWVTFSGKTEDELSGHLESVRECAK
RLGMHWAHRRACFLLGRLCARKVKFSQARVYYEEALSVCVDSFSDTPLLIALVTNLTAVY
LKQRMTDKLPQTLEKASALLLCLPCHSFTSTDEVELLKLLMRRSVVMVDKHLEARVCYLI
SSLFLLLRKTDDALPFVERLQFLSVTLSVTEGRPIAPLDLNWLLSWLYHRKYMPYLVLAS
LSLDSRQDHSLHNTFQRIELFIRNSVRLNPCWKEGTSLLPAQIVVYLQQALAVAEQVDDK
KTQRDLCLGLASIYQQYGALDKAVCCAQQAVETGGHINEEEGFEASVLLGWLLVLTGQAE
KAQSVLEPLLTSLQGTDCPTQRGVIHNLLALCLRHQSRIPEAGWHFHSALVISRESGNQR
NQALALANMGCLALVVGASWVAERFLVRSLCLFLELWESPTDEEHVQTYLWLGRSYKDRG
RSQDIRACYEMGFLIALHARNLHSQMVVAKVLSRLYADMLLYGQSIVYYEHCVLVSRELK
DKRLEGEYLEILSSLYLSLNTEKSSRKSLDYTKQSLRISIDLGKREEESETWLQVGRIYY
LIQEDELADMYLQAAVKTALRMNDPYFAMSIYEEAGDVYFKGHRNRMASLPFYRDGSLPF
ARSIKDVHSEFRLLSKLTELLMNQGEQEEALQYATLAVQIASKTGVRENERTAYHRLATI
YYSLQQYEMAENYYLKCLSLCPPVLQHPTEARYYTKVYSRLGNLTLHKLKDAFDAVGYFQ
LALAAALEDQANPEALYVVYMKLAEIHGNHMPDAQLCQVYRDRAQSLKRVLAGVESAAVG
EENVDYADTESGQKKEKNLDADMGHTEILVKRNGIFDSIPEDAKCEDDPPLRTSITHVNS
KHRSDTNLRDANGKEDHNHYLPDTDSPYPDVFASETETIASQSYSDSILTESFDTAKEQI
SDSSSSTETLQTHQNPTDGKDFDTDHSMNSQIPVNHTSDMTGHADARDTDSDIQDKQNTP
TTETDPYADQIQTEPDIA
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagctgccggctcctgggccagatggcgtcttgttgctgcaga
ccgctcctcaactcctcctgttgtggaccgctcatcaaagtctgcctctcctccttcaca
gatatctctcctgcagagctggatgctctttggagggagccgccatatactctaaatgaa
cacttctcaggaaatgacaacatgactcaaggagcttgtgaagaggaggacggtcctcta
gtggagtcaggtgaaggtggagtggagtctgatagctactggaagaagaaagaggctttt
cttagaggaagcaacgtgtcattgggagagaaattctcttcagaaattgtgctgttgttc
acggggcggaggcgcgccagtgtggatcctgaccgggccctacaggaggcgctgcgcacc
cgactccgagtggtggagagcaacagccaggacgtcatacagctctttaaagacttgtct
gcacgtctggtctctgtccatgctgagaaggatagctttgttctcacattcaaaacggtg
gaggaaatctggaagttttcaacgtacttatcattaggttatgtggctcgttgcttggag
aacttcctgtgtgatcaatcagtctggctggacccagagctgcttagtgacttggagatc
aatgtaacagtggatgaggaacatctggccaccctctacctgggacttttactccaggaa
ggttctttctttgccaaggcgctgtttacaagaagcgagcaggatgaggacgacgaagaa
cagctgtcattcaaaaagaacgacctgctgatggtgaaggacaccgggcaggacaacatg
tgggagggcaccatgctctccacgggaaatcacggtctggtgccagtaaacgccatgcag
ccgctgccctaccccttctaccagtggttcctgaggaagtacccaagccatgctggatgc
tcattgacagacaaggaaccatttgaacattctattgtgacaggttcatgtgtagtcaca
gtcgactacagtccaggtggcccagatgagctccagttgagtcaaggtgatactgtagag
atccagggtctgctgctccgaggcctggacatttttataggcagacacgcttccacagga
cacactggctttgtacacaaggcgcacgtcaagcctctgaacaccttaccactagatgaa
caactggtctttctgacagaggaggagaaggccagcctgggtcaggttaacccatgtggc
tctgagccgattgacaacagcctgctggaaagactcttctcgtctgaaatcagctctgtg
tacaggctagatagactggatgacagtgatttcatgtacatcaggagtcggcctaaacat
gatcataagattcttacaagcacccgtcagagtgtcatgtcagagagaagtggaggaaca
cccccataccagtcgtcccctcggccgtctttctctcagtcctcccctcgtgtgtctgtc
tatcactctcacaatcctcttccgagagagggagagcgactgtccttcactctggacgac
acattcagagaactggatgaattccaggaagatcctcctcttttcttggaagagaacagc
tgggatggggaggagtccgagctcagtgacccaacgctgaccctgctcaatcaagaacac
ttccaggaggaatttctgcctctgtacgacctacagtattccttcctgtgggtgaccttt
agcggtaagacagaggacgagctgtcaggacaccttgagagtgtcagggagtgtgccaag
agactgggcatgcattgggcgcatcgacgggcatgctttctcctgggaagactgtgtgcc
aggaaggtcaagttctcccaggcacgtgtttactacgaggaagctctgagtgtttgtgtc
gacagtttctctgacacgccactcctcatcgctctcgtcacaaacctcactgccgtctac
ctgaagcaacgcatgactgacaaactgccccagactctggagaaggccagcgccctgctc
ctctgtcttccctgccactccttcacgtccacagacgaagttgaactcctgaagctcctc
atgaggagatcagtggtgatggtggacaaacacctggaggctcgcgtctgctacctcatc
tccagcctcttcctgcttctcaggaagactgatgatgctcttccctttgtcgagcgactc
cagtttctctcagtgactctctctgtcaccgagggtcgacctatagctcccctggacctc
aactggctcttgagttggctctaccatcgtaaatacatgccttacttagtgctggcctct
ctgagcctggattcaagacaagaccactccctccacaataccttccagaggattgagttg
tttatcaggaactctgttcgtctgaacccgtgctggaaggaagggacctccctgcttcca
gctcagattgttgtttacctgcagcaggccctggctgtagctgagcaggtggacgacaaa
aagacccagagggatctgtgcttgggcttggcctcaatttaccagcagtatggtgctctg
gataaagcagtgtgctgtgctcaacaagctgtggagacgggaggccacatcaatgaggag
gagggctttgaggcgtctgtgctgctcggttggctgctggtgttaacaggtcaggctgag
aaggcccagagtgtcctagaaccactgctcacatcactacagggcactgactgtcctact
cagcgaggtgtgatccataacctcttggctttgtgtctgaggcatcaaagtcgcatccca
gaagcaggctggcatttccactctgctctggtaatctccagagaaagtggaaaccagagg
aatcaggccctggcactggccaacatgggctgtctggcgctggttgtgggagcatcttgg
gttgcagaacgcttccttgtcagatccctgtgcctttttctggagctgtgggaaagcccg
acagacgaggagcatgtccagacctacctttggctcgggcggagctacaaggacaggggg
agaagtcaggacatcagggcttgttatgaaatgggatttctgattgcactacacgccaga
aacttgcacagtcagatggtggtagccaaggtgctaagccggctatacgccgacatgctg
ctctatggtcagagtatcgtctactacgagcactgtgtgttggtatccagagagctgaag
gacaagagactagagggagagtatctggaaatcctcagcagcctctacctctcgctcaac
accgagaaatcgtctcgcaagtctcttgactacaccaagcagagcctgaggatttctatt
gatttgggcaagagagaggaagagtcagagacctggctacaggtgggacgcatctattac
ctcatccaggaggacgagctggctgacatgtacctgcaggcagcagtgaagacagccctg
aggatgaatgatccttactttgctatgagcatctatgaggaggcaggagatgtctacttt
aaaggccacaggaaccgcatggcctcactgcctttctacagggatggcagtttgccattt
gcacggagcatcaaagacgtccactcagagttccgtttgttaagtaaactgacggagctg
ttgatgaatcaaggagagcaggaggaggctctgcagtacgcaacgctggctgttcaaatc
gccagcaaaacaggagtgcgtgagaatgagcggacagcttaccatcgtctggctacaatt
tactacagcctgcagcagtatgagatggcagaaaactactacctgaagtgtctgtctctg
tgtccacctgtcttgcagcaccccaccgaggctcgctactacactaaggtctacagcaga
ctgggaaacctcacgctacacaaactcaaggatgcttttgatgcagtaggctacttccag
ctggctctggcagcagcacttgaggaccaagctaaccccgaggctctgtatgtggtgtac
atgaagttggccgagatccatggcaaccacatgcccgacgctcagctgtgccaagtttac
agagacagagcccagagtctgaagagagttttggctggagtggaaagcgctgctgttgga
gaggaaaacgtggattatgcagacacagagtctggccaaaagaaggaaaagaacttggat
gctgatatgggacatacagaaattctagttaagagaaatggcatttttgattccatacct
gaagatgcaaagtgtgaagatgacccacctttaagaacttctataacccatgttaactca
aagcacagatctgacactaatctcagagatgctaatgggaaagaagatcacaatcactat
ctccccgacacagacagtccttacccggatgtgtttgcctctgagacagaaaccattgcc
agtcagtcatacagtgacagtattttgactgagtcttttgatacagctaaggagcagatc
tcagactccagcagctccactgagactttacaaactcaccagaatccaacagatgggaaa
gactttgacactgaccacagcatgaacagccaaatacctgttaatcacactagtgacatg
acaggacacgcagatgccagagacactgattctgatattcaggacaaacaaaacactccg
acgacagagacagatccttatgcagatcaaattcaaacagagcccgatattgcctaa
DBGET
integrated database retrieval system
