Amphiprion ocellaris (clown anemonefish): 111588189
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Entry
111588189 CDS
T06018
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111588189 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aoce04812
]
111588189 (clasp1a)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
111588189 (clasp1a)
Cytoskeleton proteins [BR:
aoce04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
111588189 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Sec7-like_HUS
Adaptin_N
Cnd1
RTP1_C1
MMS19_C
ParcG
HEAT_DAAF5
Paxt-1_C
TAN
Motif
Other DBs
NCBI-GeneID:
111588189
NCBI-ProteinID:
XP_054871454
Ensembl:
ENSAOCG00000022851
LinkDB
All DBs
Position
11:26006012..26110113
Genome browser
AA seq
1643 aa
AA seq
DB search
MMEPSMENCLALVLQKDVGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV
NSSNFKVALLGLDLLSALVTRLMERFRAQVGTVLPSLIDRLGDAKDQVRDQDQTLLLKIM
EQAATPQFVWDRMLGGFKHKNNRTREGVCLCLIATLNTYGAQGLTLSKIVPHICNLLGDP
TSQVRDGAMSCLVEIYRHVGERVRLDLSKKGLPQSRLNVIFSRFDEVQRSGNMISSSGSD
KNFEDEDSVDGGRSSSSSSSKAPPSGRRTVMSSVKRPSSATTTKAPGKEAGAGAVDEEDF
IKAFEDVPSVQIYSNRELEDQLTKIREVLSDDKHDWEHRVVALKKVRSLMLAGATEYEGF
PQQLRLLEAPFKLSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESVMPTLLNLVPNSA
KVMATSGVAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTNTLER
HVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLKS
SDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSITRSKLVGTRVSTTPGSLQRSRSDID
VNAASSAKSRLSTVPASSPFGTAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGANT
SVVDSRGRSRAKVVSQSQRSRSANPISAGSRSSSPGKLLGHSSYGRIPRVTASASTTPAD
KRSRIPRSQGCSRETSPSRLGLASLCGKALLPAALPYRTLARSRIPRPSMSQGCSRDTSR
ESSRDTSPARGFTPLASRRHSRSTSALSTADPHGQSDRYGLIHQARISASVNAMRVLNTG
TEVEAAVADALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYGSRNGGIPH
YLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPH
SKVFSMFLETLVDFITVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESF
PFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITW
TTEPKSSDVRKTLHNWVSEELAGRSSTAALLSTEGNQEERCKQAAQVVLISLFELNTPEF
TMLLGALPKTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGRTPQRHTPSRTSPLTSPTN
CSHGGLSPSRLWGWGVDGLSKHPPAPPPPPPPHSTPAAPSLRVLRRAYSPSMMEYDTENM
NSEEIYSSLRGVTEAIQSFSYRSQEDLNEPVRREGKRDDAAGREGVASSPGSDARLGLDM
VEGGRTALDNKTSLLNTPSPRSFSGPRSREFAPYGYGETICTYDKSALKEAVFDDDVEQF
RDCRRQESGENKMTLPKVFPVGQDHSDLVADLLKELSNHNERSEERKGALLELLKIARED
SLAVWDEHFKTILLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEA
HKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIAK
DSLLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLN
LYIKRAQTTNSNSSSSSDVSSHS
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcccagcatggagaactgcctggccctggtcctgcagaaggatgtgggtcga
cggcttcaggtggggcaagagattattgattacattttggacaaggagaagtcccatgac
ttggagcaagaccagacagcgctggacaagatggttgatgggattgccagctcctgggtc
aattctagcaactttaaggtggctctgctcggcttggacctcttatctgccttagtgaca
aggttaatggagcgatttagggcacaagtgggaacagttctgccaagccttattgatcga
ttgggagatgccaaagaccaagtacgagaccaagaccaaactttgctgctaaagatcatg
gaacaagctgccaccccgcagtttgtatgggacagaatgctgggaggcttcaaacataaa
aacaacagaaccagagaaggagtgtgcctttgcctcatcgccacactgaacacatatgga
gctcaaggcctgactcttagtaaaattgttcctcatatatgtaacctcctgggggacccc
acaagccaggtacgtgatggagctatgagctgcttagtggagatctacagacatgttggt
gaaagggtgaggctggatctcagcaagaagggcctgccacagtcacggttgaatgtaatc
tttagcagattcgatgaagtccaaagatctgggaacatgatctcatcttccggttcagat
aaaaactttgaggatgaggactctgtggatggaggccggtcctcctcttcttcctcctcc
aaagcaccccccagtggcaggaggactgtaatgagctcagtgaaaagacccagctcagcc
accactacaaaggccccaggtaaagaagcaggtgctggtgctgttgatgaagaggatttc
attaaagcctttgaagatgtgccctcagtccagatctactctaacagagaactagaggac
cagctgacaaagatcagagaagtgctgtctgatgacaaacatgactgggagcaccgagtg
gtcgcgctgaaaaaggtccgttcactcatgttggcgggagctactgagtatgaaggtttc
cctcagcagttgcggcttctggaggctccctttaagctgtcggctaaagacctgcgctcc
caggtggtccgtgaggcttgcatcacactaggacatctgtcatcattgctgggtaacaag
tttgaccatggagcagagagtgtcatgcccacactgctgaaccttgtgcccaacagtgcc
aaagtcatggctacatctggggtggctgccatacgcctcattctgaggcatacacactat
ccacgtcttatccccatcatcaccagtaactgcacctccaaatcagttgcagtcagacga
cgttgctatgagtttcttgaccttatgctgcaggaatggcacactaatacactggaaaga
catgtagctgttctgactgagaccatcaagaaaggcatacacgatgcagactccgaggcc
aggtccattgcaagaaagtgttactggggtttccatggtcactacagccgggaagcagag
catctgttccaggcgctggagtccacttaccagaaggccctccagtcccacctgaagagc
tctgacagcattgtgtctctacctcagtctgaccgttcctcgtcatcctcacaggagagt
ctcaaccgaccactgtctgtgaagagtgtcattggagggagcataactaggagtaagcta
gtgggcaccagggtgtcaactacaccaggttccctccagcgctcccgtagtgatattgat
gtaaatgccgcctccagcgccaagtcacgtctttccactgttcctgcctcctcaccattc
ggcactgcagctgccctccccccaggatcctacgcctcattagatggtactcccggtaaa
agcgatggtcgtgttcgcacaaggagacaaagctcgggcagtgtaggaggagccaataca
tcagttgtggacagcagggggcgaagcagggccaaagtggtctcccagtcccagcgatcc
agatcagccaatcccatcagtgctggcagtcgctccagctcaccaggaaagcttcttggg
cacagcagttatgggcggattcctcgtgtcacggcatcagcctccactacgccagcggat
aagcgcagcaggatccctcgcagccaaggttgcagccgagagaccagccccagcaggctc
ggccttgccagcctgtgtggtaaagctcttcttcctgctgctcttccctaccgcacgcta
gcccggagccgcattccccgtcccagcatgagtcaaggttgcagtcgcgacaccagtcgc
gagagcagccgtgacaccagccctgctcggggttttactccactggcctcccgacgtcac
tcccgttcaaccagcgctctttccacagccgatccccacggccagtcagaccgatatggt
ttgattcaccaggcaagaatttctgcatcagttaatgccatgagggtccttaacaccggc
actgaggtggaggcagcagttgctgatgcactgctattaggagactcccggaataagagg
aagccgttgagaaggaggtatgaatcaccggggatgtactctgatgatgatgccaacagt
gatgcatctagcgcatgctcagagcgctcatatggctcccgaaacggaggcattcctcat
tatctgcgtcagactgaggatgtggcagaagtcttgaaccactgtgccagctccaactgg
tcagagaggaaggagggtctgttgggcttgcagaatctcctcaaaagccaaagaatactg
agccgagtggagctgaagagactttgtgagatcttcacaagaatgtttgcagatccacac
agcaaggtgttcagcatgtttctggagactcttgtggacttcatcacagtacacagggag
gacttgcaggactggctttttgtcctgctcactcagctcctgaagaagatgggggcagac
ctgctgggatctgtccaggccaaagtccagaaggccctggatgtcacaagggagtctttc
ccattcgatcagcagttcaacattctgatgaggtttattgtggatcagactcagacacca
aacctcaaggtaaaggtggccattttgaagtacatagagtccctggctcggcagatggac
ccaacagactttgtcaactcaagcgagacacgactggcagtatctcgcatcattacttgg
accactgaacccaaaagttctgatgtcaggaagacccttcataactgggtgagtgaagag
ctagctggcaggtccagtactgcagccttactgtccactgagggcaaccaggaagaaagg
tgtaagcaggcagctcaggtggtgctgatctccttgtttgagctcaacactccagagttc
actatgctgctgggagccttgcccaaaacctttcaagatggagccactaaactgctgcac
aaccacctgaagaactcgagcaataccagcagcagtgtgggatctccgagtaacaccatt
ggtcggacgccacaacgccacactcccagcagaaccagccccctcacctcaccaacaaac
tgttcccacggtggactgtctccaagtcggttatggggttggggtgtcgacggactgtca
aaacacccccctgcccctcctcctcctcctccgcctcactccacccctgctgccccctcc
ctaagggtcctgcgcagagcatattctcccagcatgatggaatatgacacagaaaacatg
aattcagaagagatctacagctcactccgcggtgtcactgaggccatccagagtttcagc
taccggagccaggaggacctcaatgagccggtccgaagggagggcaagagggatgatgca
gcagggagagaaggagtagcatcatctcctggttctgatgcccgcttgggcttagacatg
gtggaagggggtcgcaccgccttggacaacaagacatctctactaaacacaccttcacca
cgctctttctctgggccacggagtcgtgagtttgcaccatatggctatggagaaacgatc
tgcacctatgacaagagtgccctgaaggaggccgtctttgatgatgatgtggaacagttc
cgagactgccgccgtcaagaaagtggcgaaaacaagatgacactccccaaggtctttcct
gttggtcaggaccactcagacctggtggctgatctgctcaaggaactgtccaatcacaat
gagcgctctgaggagcgtaaaggcgccctgttggagttgcttaaaattgcacgagaagac
agcctggctgtgtgggatgaacactttaaaaccatcctcctcctcctgctggagacactg
ggtgataaagatcacaccatccgagccctggccttgcgtgtgctcaaagaaattttgagg
aaccaaccagcccgctttaagaactatgctgagctaactatcatgaagacactggaggct
cacaaagactctcacaaggaggtggtgcgtgcagctgaggaagcggcgtccaccctagcc
ggctccatccacccggagcaatgcatcaaggtgttgtgccctattgtgcagacggccgac
taccccatcaacctggctgccatcaagatgcaaaccaaagtcattgaacgcatcgctaag
gactcattactgcagctgctgcccgacataatccctggacttctgcagggctatgacaac
acggagagcagcgttcgcaaggccagtgtgttctgtctggtggctatctactctgtgatt
ggcgaggagcttaaaccccacctggcacagctcacgggcagcaagatgaagttactgaac
ctgtacatcaagcgtgcccaaacaaccaacagcaatagcagcagttcctctgatgtctcc
tctcacagttag
DBGET
integrated database retrieval system
