Amphiprion ocellaris (clown anemonefish): 111588252
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Entry
111588252 CDS
T06018
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03030
DNA replication
aoce03410
Base excision repair
aoce03420
Nucleotide excision repair
aoce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111588252 (rfc3)
03410 Base excision repair
111588252 (rfc3)
03420 Nucleotide excision repair
111588252 (rfc3)
03430 Mismatch repair
111588252 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoce03032
]
111588252 (rfc3)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111588252 (rfc3)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111588252 (rfc3)
DNA replication proteins [BR:
aoce03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111588252 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
111588252 (rfc3)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111588252 (rfc3)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111588252 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
111588252 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
DUF2247
ABC_tran
MyTH4
AAA_5
Motif
Other DBs
NCBI-GeneID:
111588252
NCBI-ProteinID:
XP_023154284
Ensembl:
ENSAOCG00000008483
LinkDB
All DBs
Position
14:complement(10384681..10388114)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLGKLDFHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIRSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SVDQDVPETDWVVYLRETANAIVSQQTPQRLLEVRARLYELLTHCVPPDVIMKGLVKELL
SNCDGQLKTEVAHMAAYYEHRLQLGNKAIYHLEAFIAKFMAIYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatgggtggacaaatatcgtccgacctccctcgggaaactggactttcataaa
gagcaagcgactcagctgaaaaacctggtccaatgtggcgacttcccacacttgctggtg
tacggtccgtctggtgccgggaagaagacccgcatcatgtgtctgctgagggagttgtat
ggagcaggagtggagaagcttcgcatagagcaccagaccatcgtggctccctcaaagaag
aaaattgagatcaacacaatagccagcaactatcacttggaagtcaacccaagtgatgca
ggaaaccaggaccgtgtggtgattcaagagctgattaaaactgtggctcagtcccagcaa
atccagtcaagcacccagagagagttcaaagtggtgttgctaacagaggtggacagactc
acaaaggatgcccagcatgctttgcgtcgtacaatggaaaagtacatggctacctgccgt
ctcatcctctgctctacctccacctccaaagtcattggaccgattcggagccgttgtctg
gctgtcagagttccactgccgagcacagaagaggtctgtagtgttctcacatccgtctgt
aaaaaggagggtctgcttctccctcctgagctggccaaacagatcagtgagaaatctggt
cgcaacctccgcaaagcccttttgatgtgcgaggcctgcagagtgcagcagtatccgttc
tcagtggaccaagacgtcccagagacggactgggtagtctacctcagagaaacagctaat
gccatcgtcagccagcagacacctcagaggttgttggaggttcgggccagactgtacgag
ctgctgactcactgtgttcctcctgacgttatcatgaagggtttggtgaaagaactgctg
agtaactgtgatggccagttgaagacggaggttgcccacatggcagcctactatgaacac
agactacagctgggcaacaaagctatctaccatctagaggctttcatcgcgaagttcatg
gccatctacaagaagttcatggaggacggtctggatgccatgatgttttga
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integrated database retrieval system
