Amphiprion ocellaris (clown anemonefish): 111588359
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Entry
111588359 CDS
T06018
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b
KO
K13091
RNA-binding protein 23/39
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111588359 (rbm39b)
Spliceosome [BR:
aoce03041
]
Common components
Common spliceosomal components
General mRNP proteins
111588359 (rbm39b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
111588359
NCBI-ProteinID:
XP_023154492
Ensembl:
ENSAOCG00000006206
LinkDB
All DBs
Position
8:26382175..26389376
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AA seq
497 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDENKSSHANGHDDQSKKKRRSRSKSRSPGSRKRRSRSKDKKKG
KKRSKSRERKRSRSRERHRSRSRSKDRSGRYRARRSPIRKRSKSRSPFKKEKSPIRQPID
NLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVE
ASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGPMRLYVGSLHFNITE
EMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKV
GHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTG
SIPFGNIAAPAVPAPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPSWASEIQDDVIEE
CNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHN
LFPDSVTAKQLLMPARR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgattttgacgttgaggccatgctggaggctccatatcgaaaggatgagaac
aaatcttctcatgcaaacggacacgatgatcagagcaagaagaaaaggaggagccgaagc
aaaagccggagccctggctctaggaagaggagaagcagaagcaaagacaaaaagaagggt
aagaagaggagcaagagccgagaaaggaaacgaagccgcagcagagaacgacatcgcagc
cgctctcgaagcaaggatcgatctggacggtacagagcacgcaggagtcccatccggaaa
cgttccaaaagtcgaagccccttcaaaaaagaaaagagtcccatcaggcaaccaattgac
aatctaacaccagaggaaagagacgctcgtacagttttctgtatgcagcttgctgcaaga
atcagagcacgagacctggaagatttcttttcagctgttggaaaggtcagagatgtgaga
atgatctcggacagaaactctcgcagatcaaagggcattgcttacatagagtttgtggag
gcctcttctgtaccactggcaattggattgaccggccagaggcttttaggagtgcccatc
atcgtccaggcatctcaggcagagaaaaacagagcggctgctgctgccaacaacctacag
aagggcagttcaggtccgatgcggctgtatgttgggtcactgcacttcaacatcactgaa
gaaatgcttcgagggatctttgagccgtttgggaagattgaaggaatccagctcatgatg
gacagtgaaactggacgatccaaaggatatggcttcatatcgtttgcagacgcagaatgt
gcaaaaaaggcactggagcaactgaatggctttgagcttgctggacgtccaatgaaggtg
gggcatgttacagagcgctcagactcatcgacagccagctcgttcctggataatgatgag
cttgagagaaccggcatcgaccttggcaccacaggacgtctacagcttatggctcgacta
gcagaaggaactggtctgaagattcctcctgctgctcaacaggctctacagatgactggg
tccataccttttgggaacattgctgctccagcagttccagctcccgctccaagccaagct
ttgaacctgccatcgcagcctctggccacgcactgcctccagctgtccaacctgttcaac
ccacaagcagaaaatgatccaagctgggcttctgaaatccaagacgacgtgattgaagag
tgcaacaaacacggaggaatcgttcacatctatgttgataagaactctgctcaaggaaat
gtgtatgtgaagtgtccctcaataccagcagcgatggccactgttaatgcacttcatgga
cgctggtttgcaggaaaaatgataacagctgcctacgttcctttaccaacctaccacaac
cttttccctgattcagtaacagcaaagcagcttctaatgccggcacgtcgatag
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