Amphiprion ocellaris (clown anemonefish): 111588422
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Entry
111588422 CDS
T06018
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04621
NOD-like receptor signaling pathway
aoce05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111588422 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111588422 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aoce04054
]
111588422 (nod1)
Pattern recognition receptors [BR:
aoce04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
111588422 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_4
LRR_6
NOD2_WH
AAA_16
NPHP3_N
AAA_22
PIF1
ABC_tran
ATPase_2
RsgA_GTPase
AAA_30
MRM3-like_sub_bind
RNA_helicase
NB-ARC
AAA_18
Motif
Other DBs
NCBI-GeneID:
111588422
NCBI-ProteinID:
XP_023154590
Ensembl:
ENSAOCG00000019237
LinkDB
All DBs
Position
9:complement(37698843..37708335)
Genome browser
AA seq
941 aa
AA seq
DB search
MGQMEEAKVSCLSLLTYHRELLVSRLRSIQCILDNLLACGFLCEEDVEIVQRTVTKTDQV
RKILELVQCKGEEACEYFLFIIYNVHDAYIHLQPWLKEINYQPSKDVTVMKVVNTDPISR
YCEKLRHEMNRDTSFIMSYGQKEETRLEDLYTDTVMEVLNNCNESLGFLESLDQLLGDNS
VFNSQGEIIYVMGDAGVGKSILLQKLQNLWSKKELHTDTIFFFKFRCRMFSIFKDTDQIS
LRDLLFKHNCYPDHDPDNEIFDYILRFPEKVVFTFDGYDEIQEHVDLMNVPEVVSPEDKA
NPLQLLISLLCGKLLKGSKKVLTARTGIEIQSTVIRKKVMLRGFSPAHLKIYIDLHFKEQ
EHRDLVSVQLNASPYLCGLCSTPLFCWIVFKSFRHLHTMHDNFHLPDTCITLTNIFLLLS
EVFLSRLASPAPSLLKKSTRCTSETFTAGLRPLAAFAKLALQSMERGSFICNQEEISACG
LTEEDLPLGFLRPVHEIDGNGSPATFEFLHITLQSFLAAFALVLDEQAAASSILKFFMEC
SRKRQPFCLPVDFCIGSSSKPSEKKPFAPNEHLQFTNLFLCGLLSKTNTGLMGHLLSPIL
LRKKQALLKSYLSTSVKSHLHGLPHHSASDGKAVHVLGNFLWMLRCIFETGSKDIAQMTA
KGITAEFIKLGYCNVYSGDCTALNFVLQHRKKLLGVDMDNNNISDYGVMQLKPSFCKMTV
VRLCVNHLSDSSIEILAEELRKHKVVKTLGLYNNHITDAGAKLVAQIIEECPKLRIVKIG
NNKITSVGGRYLANAIQKSTSIFDVGMWGNSIGDKGAEEFAQALRNHPSLTNLSLSANGI
TSNGGKCLAEALKENKVLRIFWLVQNELTDVAAPHFAELIQANTGLSHLWLISNQFTVDG
IRHLAEALTHNTELKEICAKGNQLSEEEEKEFQSEKRLRFN
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagatggaagaagccaaagtgtcgtgccttagccttctcacctaccacagagag
ctgctggtgtccaggctgaggagcattcagtgcatcctcgacaacctgttggcatgtggc
ttcctctgtgaagaggatgttgagattgttcagagaactgtcactaagacagatcaggtg
cgcaaaatcttggagctagtgcaatgcaagggggaggaggcctgtgaatacttccttttc
atcatatataatgtccacgatgcatacatacacctccagccatggctgaaagagatcaat
taccaaccaagcaaagacgttacggtgatgaaagtggttaacactgatcctatcagcagg
tactgtgagaagctgagacatgaaatgaaccgggacaccagcttcatcatgtcgtatggc
cagaaagaggagacccggctggaagacctctacactgacactgtgatggaagtgttgaac
aactgcaatgaaagtctgggtttcttagagagcctggaccagctcctgggagacaactca
gttttcaattcccaaggtgaaatcatctatgtaatgggggatgctggtgtgggaaaatcc
atccttctgcagaagcttcagaacctctggtccaagaaggagctgcacacagatacaatc
tttttcttcaagtttcgttgtaggatgttcagcatcttcaaggatacagaccagatctcc
cttagagatcttttattcaagcacaactgctacccagatcatgatccagacaatgaaatc
tttgattacatcctgcgcttccctgaaaaggttgtatttacctttgatggctatgatgag
attcaggagcatgtcgacctgatgaatgttcctgaggtggtgtcaccagaggacaaggct
aaccccctccagttgctcatcagcttgctctgtggaaaactactcaagggctcaaagaag
gtgctgacagcccgaacagggattgagatccaaagtacagtgatccgaaagaaggtcatg
ctgcgtgggttctccccagctcacctaaagatttacatagatctgcactttaaggagcag
gagcacagagacctggtgtcagttcagctgaatgctagtccctacctctgtggcctgtgc
tccacaccgctgttctgctggattgtattcaagagctttaggcacctacatacaatgcac
gataattttcatctgcctgatacctgcatcacactcactaatatctttctcctgctgtct
gaggtgttcctcagtcgcttagcctcacctgcaccgtctttgctgaagaaaagcactcgc
tgcacctcagagacattcacagcagggctcaggccccttgctgcatttgccaagctagca
cttcagagtatggagagaggtagcttcatttgcaaccaagaggagatcagtgcttgtggt
ctgacagaagaggacctgcccctggggtttcttagacctgttcatgagattgatggcaat
ggaagccctgctacgtttgaattcctccacatcaccctccagtctttcttggcagcattt
gctcttgtgttggatgagcaagctgctgccagctctatccttaagttcttcatggagtgc
agcaggaaaaggcaaccgttctgtctgcctgttgatttctgtatcggtagctcctcaaag
cccagtgaaaagaagccgtttgcacctaacgagcaccttcagttcactaatttgtttctg
tgcgggctgctgtccaagactaacacaggcctgatgggacatctgttatctcctatttta
ttaaggaaaaaacaggccttgctgaagtcttacctgtctaccagtgtcaagtcccacctg
catggtttaccccaccacagtgctagtgatggcaaagcagttcatgttttgggcaacttc
ctttggatgctgaggtgcatctttgagacagggagcaaagacattgctcagatgacagcg
aaaggcatcacagctgaatttatcaagctgggttactgtaacgtgtactcaggtgactgc
actgccctgaactttgtactacagcatcgtaagaaactcctgggggtcgacatggacaac
aacaacatcagtgactatggagtgatgcaactcaagccgtccttttgcaagatgacagta
gtgagattgtgtgtcaatcacctgtcagacagcagcattgagatccttgcagaggagctg
cgcaaacacaaagttgtgaaaactttggggctttacaacaatcacatcacagatgctgga
gccaagctggttgctcagataattgaggaatgcccaaagctgcgaattgtcaagattggc
aataacaagatcactagtgttggtgggaggtatctggctaatgcaatccagaagagcact
tcaatatttgatgtggggatgtgggggaacagtatcggtgataagggagccgaagaattt
gctcaggctttgaggaaccacccaagccttaccaacctcagtttgtcagccaatggtatc
acatcgaatggcgggaagtgtctggcagaagcactgaaagaaaacaaggtcctccggata
ttctggttggtgcagaatgagttgactgacgttgcagctccacactttgcagaactgatc
caagcaaacactggtttaagccacctctggttaatcagcaaccagttcactgtggatgga
attagacacctcgctgaggcacttactcacaacacggaactcaaagagatatgcgcgaaa
ggaaaccaactctctgaagaggaagagaaagaatttcagtcagagaaacgtctgcggttc
aactga
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