Amphiprion ocellaris (clown anemonefish): 111588580
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Entry
111588580 CDS
T06018
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111588580 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111588580 (xrcc5)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
111588580 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
VWA
Motif
Other DBs
NCBI-GeneID:
111588580
NCBI-ProteinID:
XP_023154793
Ensembl:
ENSAOCG00000014125
LinkDB
All DBs
Position
11:complement(11599768..11610532)
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AA seq
723 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFELAKKVIQKFVQRQVFAETKDELALVLFGTD
ATNNPLDQDDQYQNITVHRHLMIPDFELLVEIENQIHPENQQADWLDALVVCMDLLQTET
QGKKCNRLNIVLLTDLNTQASPDNLDVIIENLKQAGITLQFFLPFRLEEDEEGEGDADRR
DSGHPGTGKGLSREQKSGLEMVRHVMLSLDEEDGLEEVYSFRDAIEQLCMFKRIERRPMA
WPCQLTIGSALSIRIVGYKAVTEEKLKKMWITVDAQTTKRDDVKRETVYCLDDDNETEVQ
KDDIIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFAKQSMVQRHQFMGNQVVKMFA
AKDDEHAGVALSALIRALDELQMVAIVRYAYDRRSNPQVGAAFPCIKQDYECLMYVQLPF
MEDLRHFTFPSLENKKLTPSDAQLSAVDSLIDSMMLVNKDENGEQKDLFKPHNIPNPAFQ
RHFQCLHHRAVSPGTPLPAMEPWLQATLDRPEVIRERCRAPLEEMKRKFPLTEVEKKKKL
KTSAQIFGKDAEESDAKNEKDEAEEDYNLADIAEGSVTSVGSVDPARDFRTLIKQKSLPF
REVCQQLTHRIEQLLSNKDTLYYMKSITCIQAFREQSVKLGNADLYNSYLQSLKSSIENR
GLEVFWDLLVQDAVTLISKDEVEGSTISKTEANQFLVAEEKKEEAAAPQVEDTGDVDDLL
DMM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgctaaatcagctctggttctgtgcatggatgtgggcttctccatgtccaac
tctgctccgggtgaagagcctccctttgaacttgccaagaaagtcatccagaagtttgtc
cagcgccaggtttttgcagagactaaggatgaactggctttagttctgtttggcacagac
gccaccaataaccctctggaccaggacgaccagtaccagaacatcacagtgcatcgtcac
ctcatgatacccgactttgagcttttggtagagattgagaatcagattcatccagagaac
cagcaggctgattggttggatgcccttgtagtctgcatggatcttcttcagacagaaaca
caggggaagaagtgcaatcgtctcaacattgtcctcctgactgacctgaacacccaggcc
agcccagataatctggatgttattattgaaaacctgaaacaagctggcatcaccctgcaa
ttctttttgcctttccgtctggaggaggatgaggaaggtgaaggagatgcagacagaaga
gactctggccacccaggaacaggcaaaggtctgtccagagaacaaaagagcggcctggag
atggtgagacacgttatgctaagtctggacgaggaggatggcctggaagaagtttacagc
ttcagggatgcaatcgagcagctttgtatgttcaagcgtattgagaggagacccatggcc
tggccctgtcagctgaccattggcagcgctctctctatccgtattgttggctacaaagca
gtgactgaggagaaattgaagaaaatgtggattacagttgatgctcaaaccaccaaaaga
gatgacgtgaagagagagactgtctactgcctggacgatgacaatgagacggaggtgcag
aaggatgacatcattcaaggttttcgttacggaagtgacattgttccgttctccaaagtt
gatcaagatcagatgaaatacaaacacgatgggaagtgtttcgctgtgctgggctttgcc
aaacagagcatggtacaacgccatcagttcatgggaaatcaggttgtcaagatgtttgct
gccaaggatgacgagcatgcaggagtggcgctgtcagctcttatccgagcgttggatgaa
cttcaaatggtggccattgtgcgttacgcttacgacaggcgcagcaaccctcaagtgggc
gcagctttcccatgtatcaagcaggactatgagtgtttgatgtatgtccagctgcccttc
atggaagacctcagacactttacatttccttctcttgaaaacaaaaagctcactccatca
gacgctcagctgtctgctgtcgactctctcattgactctatgatgctggtcaacaaagat
gagaatggagagcagaaggacttgttcaagccccacaacattcccaaccctgccttccag
aggcacttccagtgtctgcatcatcgggcagtaagccccggtacacctcttcccgccatg
gagccatggctgcaggctactctagatcgccctgaggtcattagagaacgctgccgggct
ccactagaggagatgaagaggaagttccctctcactgaagttgaaaagaaaaagaaactg
aagactagtgctcagatttttggcaaagatgctgaggagtcagatgccaagaatgaaaaa
gacgaggcagaggaggactataacttggctgacattgctgaaggctctgtcacctcggtt
ggaagtgtggatccagcccgagacttccgcactctgatcaagcagaagagtcttccgttc
agagaggtctgtcagcaactgactcacaggatcgagcagttgcttagcaacaaggacaca
ctgtactacatgaaaagtatcacctgtatccaggctttcagagagcagtcagttaagctg
gggaatgctgatctgtacaatagctacctccagtccctgaaaagcagcatcgaaaacagg
gggctggaagtcttctgggacctgcttgttcaagatgctgtgactctgatcagcaaagat
gaggtggaaggaagcaccatatccaaaaccgaagccaatcagttcctggttgctgaggag
aagaaagaggaggcagctgcgccacaggttgaagatactggagatgtggatgacttgctg
gacatgatgtaa
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