Amphiprion ocellaris (clown anemonefish): 111588634
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Entry
111588634 CDS
T06018
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03420
Nucleotide excision repair
aoce04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111588634 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
111588634 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111588634 (ercc8)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111588634 (ercc8)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111588634 (ercc8)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
111588634 (ercc8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
WD_LRWD1
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
111588634
NCBI-ProteinID:
XP_035799176
Ensembl:
ENSAOCG00000012698
LinkDB
All DBs
Position
6:complement(28925545..28938718)
Genome browser
AA seq
401 aa
AA seq
DB search
MLGFLTARQAGLDDPLRLRRAESTRRVLSLKLNPDRDVDRIHGNGINTVDIDAVEGKYML
SGGADGVIAIYDLENYSGKPQYTCKAVCTVGRSSRYVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNIYSHNLSPIARKHSLIAVGTKNPKIQLCDLKSGSRIH
VLHGHRGEVLSVRWSPRYEHILASASADSKVKVWDVRRASGSLFTLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTGDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVCNESRKRLQFTV
SRGCSPEFVFVPCGSSVAVYALHTGELVTMLRGHYNNVDCCEFHPDYQELYSGGKDCNIL
AWVPVLRVSDVEEETSRENKGAAGQSSVDPAFQDAWSSDED
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttggggtttctgacagcaagacaggctggtctggatgatcctctgcgactgagacgt
gcagagtcaacaagaagggtcctcagtctgaagttgaatcctgatagagatgtggaccga
atccatggaaatggcattaataccgttgatattgatgcagtcgaaggcaaatacatgttg
tctggaggtgcagatggagtaatcgccatatatgacctggagaactacagtgggaaacca
cagtacacctgcaaggcagtctgcacagtaggccggtcaagtcggtatgttcacaaattc
agtgtagagacagtccagtggtatccttacgacacagggatgtttgtctccagctccttt
gacaagaccatgaaagtctgggacactgagacattaaagcctgctgaagtgtttgagttc
gagggcaacatctacagtcacaacctgtcccccatcgccaggaagcacagtctcattgca
gttggcaccaaaaaccctaaaatccaactgtgtgacctgaagtccggctcacgaattcat
gttcttcatggtcacagaggagaggtcctgtctgtgcggtggtcacccagatacgagcac
atcttagccagtgccagcgcagacagcaaggtgaaagtatgggatgtgcgccgtgcttcg
ggtagtctcttcactctggaccagcacaatggagacaagtcgaaagcgtcctctgaggca
gtaaacacagcccataatggcagagtgaatggcctatgcttcactggtgatggcctctac
ctcctcactactggaactgatgacagaatgagactatggaatagtgccaccggagaaaac
acactggtaaattatgggaaggtctgcaacgagagtcgtaaaaggctacagttcacagtg
tcacgtggctgcagcccagagtttgtgtttgtgccgtgcggcagctcagttgcagtgtat
gccctccacacaggagaactggtcactatgctcagaggtcactataacaatgttgactgc
tgtgagtttcatccagactaccaggagctgtacagtggaggtaaagactgtaacattctg
gcttgggttcctgtcctccgtgtctcggatgtggaagaagagacgagtcgcgaaaataag
ggtgctgctggccagtcttcagtggaccctgcctttcaggatgcatggagcagtgatgaa
gactga
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