Amphiprion ocellaris (clown anemonefish): 111588666
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Entry
111588666 CDS
T06018
Name
(RefSeq) integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03266
Virion - Herpesvirus
aoce04145
Phagosome
aoce04510
Focal adhesion
aoce04512
ECM-receptor interaction
aoce04810
Regulation of actin cytoskeleton
aoce04820
Cytoskeleton in muscle cells
aoce05100
Bacterial invasion of epithelial cells
aoce05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
111588666
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111588666
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111588666
09144 Cellular community - eukaryotes
04510 Focal adhesion
111588666
09142 Cell motility
04820 Cytoskeleton in muscle cells
111588666
04810 Regulation of actin cytoskeleton
111588666
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111588666
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111588666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoce04147
]
111588666
04515 Cell adhesion molecules [BR:
aoce04515
]
111588666
04090 CD molecules [BR:
aoce04090
]
111588666
Exosome [BR:
aoce04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111588666
Cell adhesion molecules [BR:
aoce04515
]
Integrins
Integrin alpha subunits
111588666
CD molecules [BR:
aoce04090
]
Proteins
111588666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
DctQ
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
111588666
NCBI-ProteinID:
XP_035799217
Ensembl:
ENSAOCG00000011160
LinkDB
All DBs
Position
5:14205405..14251511
Genome browser
AA seq
1051 aa
AA seq
DB search
MGTVPGPPAPRSGARSCQSTVWAVVAPAVLLIQLCAAFNLDADRRVVFTGPPGSYFGYSV
EFFSNSSSILIGAPKANTSQPDVTEGGAVYLCPWRQANCNVINFDKQGDRYFYINDVNTQ
VEFKSHQWFGATVRSHGDSILACAPRYYWRTEHDTPFADVTGTCYLSVDGLKTFVEYAPC
RTERHGPAGQGYCQGGFSADFTKEGKVVLGGPGSFYWQGQLISATTEEIVKAYYPAYFLL
SVNGQIQTRQVQGTYDDSYLGYSVAGGEFSGDDEEDFITGVPKGLMLYGLVSILSGGDLK
PLLNLTGEQMGSYFGYAVAATDINKDGLDDLVVGAPMFMRRGSNGRLEELGKVYVYLQRG
PLLLEPGQSHLLGTQAFSRFGTSLAPLGDLNQDGFNDMAIGCPYGGDDQQGLVFIYNGHA
GGLKDTPTQTLSGQWASSSFPASFGFALRGDRDLDQNGYPDLIVGAFGIDKAVLYRARPI
VSASASLTVQPTMFNQEEKTCLLIIGNETISVSCVSISFCLLANGKHLPSHLGFVVEVQL
DSVKQNQKKSIRRTLFLESQQPSLVKTFSLANGERLCHDSKIYLRAEEEFRDKLSPIYIS
LNFSLDPQALLDQHGLSPILNYHTEQLIEQKAQIQLDCGDDNICVPDLKLAVYGDRTEVY
LGDENSLSLTFNARNEGEGGAYEAELYVALPSEADYSGIARNNASLTQLTCSYEAENQTR
YLVCDLGNPMKSGTSLMAGLRFTVPRLKDTHKTIQFELQIRSKNANNSESEVVLYELEVA
AVAEVILQGVSRPDKVIFPPPNWTVRQSLVEEQDVGPELQQVYELVNNGPSLVSQSTLEV
KCPLKAHGYELLYPLEILTEGPLSCSSKTTFNALKLKPPALEGPTALKSSTEHHIQRREV
YRDPLAEQTNLTCSAVECWQLQCNVGLLQRGASVLLTVRSRVWAETFIERAHKQFILECS
VHYKVNRMPYLIPPKFKSSGSKKVVTAVIWNKPDNQFSVPVWIIILAVLVGLLLLALLIY
LLYKMGFFKRSDPYATTLEKAQLKPQASSEA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgttcctggacctccagctccccggtcaggggcaagaagttgtcagagcacc
gtgtgggctgtagtcgctccagcggtgcttctcatccagctgtgcgccgcctttaacctg
gacgcagacagacgcgtcgttttcaccggaccaccggggagttatttcggttattcagtg
gaattcttcagcaactcatcaagcattttgatcggcgctccgaaagccaacaccagccag
ccggacgtcaccgaaggaggagctgtgtacttgtgcccctggagacaagctaactgcaac
gttatcaacttcgacaagcaaggtgaccgttatttttatataaatgacgtgaacactcag
gttgagttcaagtcccatcagtggtttggagctactgtgcgttcccatggtgacagcatc
ctggcttgtgctcccaggtattattggaggaccgagcatgacacaccctttgctgatgtt
acaggaacatgctacctctctgtagacggtctcaaaacatttgtggaatacgcaccatgc
cgaacagaaagacatggacctgctggacagggctactgtcaggggggatttagtgctgac
ttcaccaaggaagggaaggttgtgcttggaggaccaggcagcttttactggcaaggtcag
ctgatctcagccaccacagaggagattgttaaggcttactatcctgcctactttctgctg
tcggtcaacgggcagattcagacccgacaggtgcaggggacctatgatgacagttacctg
ggttactcagtggctggtggtgaattcagtggggatgatgaggaagatttcatcacagga
gttccgaaaggactcatgctgtatggtttagtgtccatactgagtggaggggatctgaag
cctctgctgaacttaacaggggagcagatggggtcctactttggctacgcagtggcagcc
accgacatcaacaaggacggtctggatgatctggtggtcggagctccgatgttcatgcgt
cgagggtctaacgggcgcctggaggagctgggtaaagtttacgtttacctccagaggggt
cctctgctgctggagccgggccagtcccacctgctgggtacgcaggccttcagccggttc
ggcacctctctggcaccgctgggtgatctcaaccaggacggattcaatgacatggctatc
ggctgtccctacggaggagacgaccagcaggggttggttttcatttataacggtcacgct
ggagggctgaaggacactcccactcagactctctctggccagtgggcttccagctctttc
ccggctagtttcggctttgctctgcgaggcgacagagatctggaccaaaatggataccca
gatctgattgttggtgcctttgggatagataaagccgtgctatacagagctcgaccaata
gtgagtgccagcgcatccctcacagtgcagccgaccatgttcaaccaggaagagaagaca
tgtttgctgatcattgggaatgaaaccatttctgtgtcttgtgtcagcatcagtttctgc
ctgctggctaatgggaagcacctcccctctcatctaggttttgtggtggaggtgcagttg
gacagtgtgaagcagaaccagaagaagtctatcaggaggactctgttcctggaaagccag
cagcccagtctggtgaagaccttcagtctcgctaacggagaacgattgtgccacgacagc
aagatctacctgcgggctgaggaggagtttcgggataaactctctcccatttacatcagt
ctcaacttcagtctggatcctcaggccctgctggaccaacatggcctcagtcccatcctg
aattatcacacagaacaactcatagagcagaaggcccagattcaactggattgcggagac
gacaacatctgcgtccctgacctcaagctcgctgtttatggtgacagaacagaggtttac
cttggcgacgaaaactccttgagcctgaccttcaatgccaggaatgagggggaaggtgga
gcgtatgaggctgagctttatgtagctcttccctcggaggctgactacagtggaatagct
cgcaacaatgcgagcctgacccagctgacgtgcagctacgaggcagaaaaccaaacccgc
tatctcgtgtgcgatctgggaaatcccatgaagtctggtaccagtttaatggctggtctt
cggttcactgtgcccagactgaaggatactcacaagactatccagtttgagctgcaaata
cggagtaaaaatgccaataactctgagagtgaggtggtgctgtatgaactggaggtggct
gccgtggctgaggtcattctgcagggtgtttctcggccagacaaagtcatctttcctcct
cccaactggacggttcggcagagtcttgtggaggagcaggatgtcgggcctgagcttcag
caggtctatgagctggtgaataacgggcccagtttggtgagtcagtcaaccctggaggtg
aaatgtcctctgaaggctcacggctatgagctgctctacccactggagatactcactgag
ggtccgctcagctgctcctccaaaacaaccttcaatgcactgaaactcaagcctccagca
ctagagggtccaacggcactgaagtccagcactgagcaccacatccagaggagggaggtg
tacagggatccactggctgaacaaacaaacctgacgtgcagtgcagtggagtgctggcag
ctgcagtgtaacgtgggtcttctgcagagaggagccagtgtcctcctcaccgtacgctcc
agagtctgggccgaaaccttcatcgagcgagcccataaacagttcattctggagtgttct
gttcactacaaggttaatagaatgccgtatttgattcctcccaaattcaagtcatcggga
tccaaaaaggtggtgacagctgtgatctggaacaaaccagacaatcagttctcggttccg
gtgtggatcattatcctggctgttctagttgggctgctattactggccctgctcatatat
ctattgtataagatgggcttctttaaaagatcggatccatacgctacgacactggagaaa
gcccagctgaaaccccaggcgtcctcggaagcttag
DBGET
integrated database retrieval system
